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Source database (GenBank or RefSeq) File type

Esch_coli_HVH_9_4-6942539_V1

Organism name:: Escherichia coli HVH 9 (4-6942539) (E. coli)
Taxonomy check:: OK
Infraspecific name:: Strain: HVH 9 (4-6942539)
BioSample:: SAMN01885675
BioProject:: PRJNA186045
Submitter:: Broad Institute
Date:: 2013/08/29
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000456145.1 (latest)
RefSeq assembly accession:: GCF_000456145.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: AVTE01
Assembly method:: allpaths v. R46382
Genome coverage:: 144.0x
Sequencing technology:: Illumina

IDs: 54221 [UID] 766208 [GenBank] 807508 [RefSeq]

See Genome Information for Escherichia coli

Pathogen Detection Resources

There are 266722 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000456145.1	=	GCF_000456145.1	Esch_coli_HVH_9_4-6942539_V1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length	4,898,314
Total ungapped length	4,869,025
Gaps between scaffolds	0
Number of scaffolds	6
Scaffold N50	4,493,926
Scaffold L50	1
Number of contigs	31
Contig N50	468,648
Contig L50	4
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	31

	ANI	Query coverage	Subject coverage
Declared type	99.00	92.43	86.88
Best-match type	99.00	92.43	86.88

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Esch_coli_HVH_9_4-6942539_V1

See Genome Information for Escherichia coli

Pathogen Detection Resources

There are 266722 assemblies for this organism

History (Show revision history)

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