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MGS485

Organism name:
Prevotella sp. CAG:485 (CFB group bacteria)
Taxonomy check:
Inconclusive
BioSample:
SAMEA3138759
BioProject:
PRJEB901
Submitter:
DTU
Date:
2013/07/17
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
GenBank assembly accession:
GCA_000437495.1 (latest)
RefSeq assembly accession:
GCF_000437495.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CBIE01
Genome coverage:
32x

IDs: 44551 [UID] 744468 [GenBank] 799308 [RefSeq]

See Genome Information for Prevotella sp. CAG:485

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length2,409,897
Total ungapped length2,406,585
Gaps between scaffolds0
Number of scaffolds114
Scaffold N5044,581
Scaffold L5017
Number of contigs201
Contig N5021,726
Contig L5036
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)201

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,409,8971142,406,58544,581870

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Prevotella sp. CAG:485Prevotella sp. CAG:485

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000512915.1Barnesiella viscericolatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type81.420.070.06

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena