Full Report

Send to:

Choose Destination

File
Clipboard
Collections

Download Assembly

Source database (GenBank or RefSeq) File type

ASM58373v1

Organism name:: Rhodococcus wratislaviensis NBRC 100605 (high G+C Gram-positive bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: NBRC 100605
BioSample:: SAMD00041784
BioProject:: PRJDB307
Submitter:: National Institute of Technology and Evaluation
Date:: 2014/02/28
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_000583735.1 (latest)
RefSeq assembly accession:: GCF_000583735.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: BAWF01
Assembly method:: Newbler v. 2.6
Genome coverage:: 98x
Sequencing technology:: 454 GS-FLX Titanium; Illumina HiSeq 1000

IDs: 124741 [UID] 958088 [GenBank] 1445678 [RefSeq]

See Genome Information for Rhodococcus wratislaviensis

Pathogen Detection Resources

There are 6 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000583735.1	=	GCF_000583735.1	ASM58373v1	Contig	Latest GenBank, Latest RefSeq

Comment



Strain NBRC 100605 available from NBRC culture collection (http://www.nbrc.nite.go.jp/e/).
The NBRC Whole Genome Shotgun Project aims to provide "reference genomes" of NBRC culture collection strains for identifying useful genes for taxonomic classification, risk/safety assessment, and industrial application, and for understanding ... the structure and evolution of microbial genomes.
(http://www.bio.nite.go.jp/ngac/e/project_wgs-e.html)  more

Global statistics

Total sequence length	10,403,277
Total ungapped length	10,403,277
Number of contigs	151
Contig N50	179,070
Contig L50	19
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	151

	ANI	Query coverage	Subject coverage
Declared type	99.11	70.33	94.08
Best-match type	99.11	70.33	94.08

Assembly

Genome Assembly

Result Filters

Organism group

Status

Assembly level

RefSeq category

Exclude

Annotation status

Taxonomy check status

Relation to type material

Assembly type

Sequence release date

Custom date range

Contig N50

Custom range

Scaffold N50

Custom range

Additional filters

Download Assembly

ASM58373v1

See Genome Information for Rhodococcus wratislaviensis

Pathogen Detection Resources

There are 6 assemblies for this organism

History (Show revision history)

Comment

Global statistics

Supplemental Content

Access the data

Assembly Information

Related Information

Recent activity

Global assembly definition

Assembly statistics

Assembly QA

Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result