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Source database (GenBank or RefSeq) File type

ASM44259v1

Organism name:: Cycloclasticus zancles 78-ME (g-proteobacteria)
Taxonomy check:: Inconclusive
Infraspecific name:: Strain: 78-ME
BioSample:: SAMN02603046
BioProject:: PRJNA201013
Submitter:: C.N.R. - Institute for Coastal Marine Environment
Date:: 2013/08/01
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
GenBank assembly accession:: GCA_000442595.1 (latest)
RefSeq assembly accession:: GCF_000442595.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Assembly method:: Phred/Phrap/Consed v. 23.0
Genome coverage:: 1965X
Sequencing technology:: Illumina

IDs: 47091 [UID] 749968 [GenBank] 753218 [RefSeq]

See Genome Information for Cycloclasticus zancles

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000442595.1	=	GCF_000442595.1	ASM44259v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::03/03/2024 05:36:50
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::2,572
CDSs (total)::2,529
Genes (coding)::2,514
CDSs (with protein)::2,514
Genes (RNA)::43
rRNAs::1, 1, 1 (5S, 16S, 23S)
complete rRNAs::1, 1, 1 (5S, 16S, 23S)
tRNAs::36
ncRNAs::4
Pseudo Genes (total)::15
CDSs (without protein)::15
Pseudo Genes (ambiguous residues)::0 of 15
Pseudo Genes (frameshifted)::4 of 15
Pseudo Genes (incomplete)::15 of 15
Pseudo Genes (internal stop)::0 of 15
Pseudo Genes (multiple problems)::4 of 15
CRISPR Arrays::1
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	2,655,425
Total ungapped length	2,655,425
Total number of chromosomes and plasmids	2

Molecule name	GenBank sequence		RefSeq sequence
Chromosome	CP005996.1	=	NC_021917.1
Plasmid p7ME01	CP006601.1	=	NC_021918.1

Molecule	Total Length
All	2,655,425
Chromosome	2,613,078
Plasmid p7ME01	42,347

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	98.70	81.05	90.28

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ASM44259v1

See Genome Information for Cycloclasticus zancles

Pathogen Detection Resources

History (Show revision history)

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Genome-Annotation-Data

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