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Bruc_meli_UK29_05_V1

Organism name:
Brucella melitensis UK29/05 (a-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: UK29/05
BioSample:
SAMN00839702
BioProject:
PRJNA173505
Submitter:
Broad Institute
Date:
2013/04/19
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000370805.1 (latest)
RefSeq assembly accession:
GCF_000370805.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AQKJ01
Assembly method:
allpaths v. R42760
Genome coverage:
175.0x
Sequencing technology:
Illumina

IDs: 674358 [UID] 597278 [GenBank] 674358 [RefSeq]

See Genome Information for Brucella melitensis

There are 615 assemblies for this organism

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History (Show revision history)

Comment

Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length3,307,170
Total ungapped length3,306,770
Gaps between scaffolds0
Number of scaffolds3
Scaffold N501,917,858
Scaffold L501
Number of contigs6
Contig N501,013,060
Contig L502
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)6

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,307,17033,306,7701,917,85830

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Brucella melitensis UK29/05Brucella melitensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000250795.2Brucella melitensis bv. 1 str. 16Msuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000250795.2Brucella melitensissuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9899.2499.95
Best-match type99.9899.2499.95

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna