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ASM29342v1

Organism name:
Neisseria meningitidis 80179 (b-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: 80179
BioSample:
SAMN00849764
BioProject:
PRJNA71009
Submitter:
Institute for Genome Sciences
Date:
2012/08/27
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000293425.1 (latest)
RefSeq assembly accession:
GCF_000293425.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ALXV01
Assembly method:
Celera Assembler v. 7.0
Genome coverage:
45.3x
Sequencing technology:
Illumina; 454

IDs: 493028 [UID] 418088 [GenBank] 493028 [RefSeq]

See Genome Information for Neisseria meningitidis

There are 8126 assemblies for this organism

See more

History (Show revision history)

Comment

Bacteria avaiable from BEI

Global statistics

Total sequence length2,187,718
Total ungapped length2,187,718
Number of contigs31
Contig N50144,577
Contig L505
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)31

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,187,718312,187,718144,57700

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Neisseria meningitidis 80179Neisseria meningitidis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900638555.1Neisseria meningitidistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900638555.1Neisseria meningitidistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.3990.3790.44
Best-match type97.3990.3790.44

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna