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ASM22748v1

Organism name:
Bacillus subtilis subsp. subtilis str. RO-NN-1 (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: RO-NN-1
BioSample:
SAMN02603351
BioProject:
PRJNA68559
Submitter:
Institute for Genome Sciences
Date:
2011/10/05
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_000227485.1 (latest)
RefSeq assembly accession:
GCF_000227485.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 370138 [UID] 306288 [GenBank] 370138 [RefSeq]

See Genome Information for Bacillus subtilis

There are 1031 assemblies for this organism

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History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::06/06/2023 01:27:36
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.5
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::4,123
CDSs (total)::4,002
Genes (coding)::3,888
CDSs (with protein)::3,888
Genes (RNA)::121
rRNAs::10, 10, 10 (5S, 16S, 23S)
complete rRNAs::10, 10, 10 (5S, 16S, 23S)
tRNAs::86
ncRNAs::5
Pseudo Genes (total)::114
CDSs (without protein)::114
Pseudo Genes (ambiguous residues)::0 of 114
Pseudo Genes (frameshifted)::73 of 114
Pseudo Genes (incomplete)::51 of 114
Pseudo Genes (internal stop)::26 of 114
Pseudo Genes (multiple problems)::29 of 114
##Genome-Annotation-Data-END##

Global statistics

Total sequence length4,011,949
Total ungapped length4,011,949
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000227495.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP002906.1=NC_017195.1

Assembly statistics

MoleculeTotal
Length
Chromosome 4,011,949

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Bacillus subtilis subsp. subtilis str. RO-NN-1Bacillus subtilis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000009045.1Bacillus subtilis subsp. subtilis str. 168type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000009045.1Bacillus subtilistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.0895.0090.41
Best-match type98.0895.0090.41

ANI result

Taxonomy check statusBest match statusComment
OKderived-species-matchna