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Taxonomy browser (Fusarium haematococcum)

Fusarium haematococcum

Taxonomy ID: 984957 (for references in articles please use NCBI:txid984957)
current name
Fusarium haematococcum Nalim, Samuels & Geiser, 2011 in [Nalim FA et al. (2011)]
holotype of Fusarium haematococcum: BPI:881227
includes:
Fusarium sp. FRC S1831
Fusarium sp. FRC S1832
Fusarium sp. FAN-2011b
NCBI BLAST name: ascomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic synonym
Nectria haematococca Berk. & Broome, 1875
epitype of Nectria haematococca: BPI:871363
culture from epitype of Nectria haematococca: FRC:S-1832, CBS:119600
homotypic synonym:
Haematonectria haematococca (Berk. & Broome) Samuels & Rossman, 1999
Neocosmospora haematococca (Berk. & Broome) Samuels, Nalim & Geiser, 2011
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium solani species complex
   Entrez records   
Database name Direct links
Nucleotide 621
Protein 149
Structure 7
Genome 1
Popset 56
PubMed Central 714
Gene 1
Identical Protein Groups 92
Assembly 3
Taxonomy 1

Comments and References:
Nalim FA et al. (2011), PubMed: abstract
Nalim FA, Samuels GJ, Wijesundera RL, Geiser DM. 2011. New species from the Fusarium solani species complex derived from perithecia and soil in the old World tropics. Mycologia 103(6):1302-30.
O'Donnell et al. (2020), doi:10.1128/mSphere.00810-20
O'Donnell K, Al-Hatmi AMS, Aoki T, Brankovics B, Cano-Lira JF, Coleman JJ, de Hoog GS, Di Pietro A, Frandsen RJN, Geiser DM et al. 2020 No to Neocosmospora: Phylogenomic and Practical Reasons for Continued Inclusion of the Fusarium solani Species Complex in the Genus Fusarium. mSphere 5:e00810-00820.
Geiser DM et al. (2020), doi:10.1094/PHYTO-08-20-0330-LE
Geiser DM, Al-Hatmi A, Aoki T, Arie T, Balmas V, Barnes I, Bergstrom GC, Bhattacharyya MKK, Blomquist CL, Bowden R, Brankovics B, Brown DW, Burgess LW, Bushley K, Busman M, Cano-Lira JF, Carrillo JD, Chang HX, Chen CY, Chen W, Chilvers MI, Chulze SN, Coleman JJ, Cuomo CA, de Beer ZW, de Hoog GS, Del Castillo-Múnera J, Del Ponte E, Diéguez-Uribeondo J, Di Pietro A, Edel-Hermann V, Elmer WH, Epstein L, Eskalen A, Esposto MC, Everts KL, Fernández-Pavía SP, da Silva GF, Foroud NA, Fourie G, Frandsen RJN, Freeman S, Freitag M, Frenkel O, Fuller KK, Gagkaeva T, Gardiner DM, Glenn AE, Gold S, Gordon T, Gregory NF, Gryzenhout M, Guarro J, Gugino B, Gutiérrez S, Hammond-Kosack K, Harris LJ, Homa M, Hong CF, Hornok L, Huang JW, Ilkit M, Jacobs A, Jacobs K, Jiang C, Jimenez-Gasco MDM, Kang S, Kasson MT, Kazan K, Kennell JC, Kim H, Kistler HC, Kuldau GA, Kulik T, Kurzai O, Laraba I, Laurence MH, Lee TY, Lee YW, Lee YH, Leslie JF, Liew ECY, Lofton LW, Logrieco A, Sánchez López-Berges M, Luque AG, Lysøe E, Ma LJ, Marra RE, Martin FN, May SR, McCormick S, McGee CT, Meis JF, Migheli Q, Mohamed Nor NMI, Monod M, Moretti A, Mostert D, Mulé G, Munaut F, Munkvold GP, Nicholson P, Nucci M, O'Donnell K, Pasquali M, Pfenning LH, Prigitano A, Proctor R, Ranque S, Rehner S, Rep M, Rodríguez-Alvarado G, Rose LJ, Roth MG, Ruiz-Roldán C, Saleh AA, Salleh B, Sang H, Scandiani M, Scauflaire J, Schmale D 3rd, Short DP, Šišić A, Smith J, Smyth CW, Son H, Spahr E, Stajich JE, Steenkamp E, Steinberg C, Subramaniam R, Suga H, Summerell BA, Susca A, Swett CL, Toomajian C, Torres-Cruz TJ, Tortorano AM, Urban M, Vaillancourt LJ, Vallad GE, van der Lee T, Vanderpool D, van Diepeningen AD, Vaughan M, Venter E, Vermeulen M, Verweij PE, Viljoen A, Waalwijk C, Wallace EC, Walther G, Wang J, Ward T, Wickes B, Wiederhold NP, Wingfield MJ, Wood AKM, Xu JR, Yang XB, Yli-Matilla T, Yun SH, Zakaria L, Zhang H, Zhang N, Zhang S, Zhang X. 2020. Phylogenomic analysis of a 55.1 kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani Species Complex. Phytopathology
O'Donnell (2000), doi:10.2307/3761588
O'Donnell K. 2000. Molecular phylogeny of the Nectria haematococca - Fusarium solani species complex. Mycologia 92: 919-938.
Rossman et al. (1999)
Rossman AY, Samuels GJ, Rogerson T, Lowen R. 1999. Genera of Bionectriaceae, Hypocreaceae and Nectriaceae (Hypocreales, Ascomycetes). Studies in Mycology 42: 1-248.

Genome Information

Go to NCBI genomic BLAST page for Fusarium haematococcum

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Nectria haematococca Berk. & Broome, 1873 taxonomy/phylogenetic World Register of Marine Species
Notes:
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Information from sequence entries

Organism modifiers

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strain
156-30-6 [6 3 6] 196-10-7 [3 3 3] 241-1-1 [3 3 3] 260499/24 [1]
4361 [1 1] 5133 [4 2] 55-5-1 [3 3 3] 5804 [4 2]
62-22 [3 3 3] 6731 [4 4] 6736 [4 4] 7096-N [4 4]
77 [2 2 2] 77-13-4 [2 2 2] 96-17 [3 3 3] ATCC MYA-4622 strain ATCC MYA-4622 [1 1] of Fusarium vanettenii
ATCC18099 [1] ATCC38135 [1] ATSTEN1 [1] CBS 119600 [11 11 8]
CBS 126407 strain CBS 126407 [6 5 1] of Fusarium ngaiotongaense CBS 352.59 [1] CBS225/58 [1 4] CFE-89 [1]
CFE-96 [1] CM 4 [1] CZC-5 [1 1] CZGN-2 [1 1]
D28As279 [1 1] F-ZCDD01 [1 1] F-ZCDD02 [1 1] F-ZCDD03 [1 1]
F1 [1] F4 [1] F52 [1] FRC S1831 [1 1 1]
FRC S1832 [1 1 1] G.J. Samuels 89-97 [1] GFR26 [1] GJS 89-70 strain GJS 89-70 [1 1] of Fusarium samuelsii
GJS89-70 strain GJS89-70 [4 4 1] of Fusarium samuelsii Gr120B [1 1] H16-B [1 1] HSY99 [1 1]
IZ1RPV407IL3RM [1 1] J49 [1 1] K-1 [1] KB-3 [1]
LAHC-FFPK-M09 [1] LDCMYE07 [1] LQ1 [229] LVPEI.B1362_09 [1 1]
LVPEI.H134_10 [1 1] LVPEI.H1375_09 [1 1] LVPEI.H141_10 [1 1] LVPEI.H1869_09 [1 1]
LVPEI.H2060_09 [1 1] LVPEI.H2173_09 [1 1] LVPEI.H338_09 [1 1] LVPEI.H3476_08 [1 1]
LVPEI.H4684_11 [1 1] LVPEI.H648_09 [1 1] LVPEI.H671_08 [1 1] LVPEI.H80_08 [1 1]
LVPEI.H812_09 [1 1] M6-B [1 1] MAFF236558 [1] MAFF236572 [1]
MFM-19f [1 1] MK-8 [1] MP VI [1 1] MPVI [2 2]
MS3 [1] MSN045 [1 1] NIAS-ITO [1] NIBSM_CcFP2 [1 1]
NRRL 32437 strain NRRL 32437 [3 3 4] of Fusarium ferrugineum NRRL 62977 [1 1] NRRL 66004 [1 1] NRRL 66006 [1 1]
NRRL 66019 [1 1] NRRL-13417 [1] NRRL13425 [1] RSL02 [1]
S3 [1 1] SS-1 [1] SUF1223 [1] SUF1327 [1]
SUF1328 [1] SUF1329 [1] SUF1356 [1] SUF1357 [1]
SUF208 [1] SUF209 [1] SUF210 [1] SUF235 [1]
SUF471 [1] SUF532 [1] SUF577 [1] SUF578 [1]
SUF654 [1] SUF678 [1] SUF704 [1] SUF755-2 [1]
SUF834 [1] SUF837 [1] SUFII-7 [1] SUFXV-1 [1]
SUFXV-23 [1] SUFXVI-5 [1] SW1 [1] T1 [1 1]
T11 [1] T213 [3 3] T213 mating population VI [3 4] T213; mating population VI [3 4]
T8 [1 1] UGC Loyola BGJKPRST 002 [1] W-8 [1 1] WA-11 [1]
WBS003 [1] Y108 [1 1] ZB075 [1] ZN-WG-10 [1]
Zbf-S18 [1 1] bxq41214 [1] mating population VI [2 2] s67 [1]
isolate
164AS/R [1] 20 [1] 4 [1] 77-13-7 [5 5]
A1S2-D11 [1 1] ACSIKS_2100356 [1] AFTOL-ID 68 [1 1] AS-WG02 [1]
Bx247 [1] CBS 225/58 [1] CCESR60094 [1] E8926D [1 1]
ECB_M128 [1] FAP3 [1 1] FR3 [1] HG23 [1 1]
HLJ_14 [1] IP2330.95 [1 1] ISPaVe832 [1] JTH_PIED_4.3_NM_Fsol [1 1 1]
JTH_PIPOPSME_10.1_NM_Fsol [1 1 1] M9 [1 1] MHR1801689 [1 1] N35 [1]
NA_PISTOLD_5.3_AZ_Fsol [1 1 1] NEHGR120B [1 1] NG_H13 [2 1 1] NHGR48 [1 1]
PVK [1 1] R1CU4A [1] RSW [1 1] RWS28 [1]
S1832_GJS0290 [1 1] S2_009_000R2b [1] S2_018_000R2 [1] S5 [1]
Saprobe 74 [1 1] T8 [2 2] TH-WG07 [1] TWD36 [1]
TeG8 [1] UAS026 [1 1] VOR10 [1 1] W_INSO2_1_13 [1]
Y166 [1 1] Y174 [1 1] Z4-30 [1] olrim81 [1 1]
ssg4 [1 1] wb394 [1]
specimen-voucher
76855 [1 1] 83364 [1 1] 83366 [1 1] GJS 89-70 specimen-voucher GJS 89-70 [2] of Fusarium samuelsii
JIY802519 [1] olrim947 (SUAS) [1 1] research collection Farrer lab 3 [1]
anamorph
Fusarium solani f. sp. pisi [11 9 7]
culture-collection
ATCC:MYA-4622 culture-collection ATCC:MYA-4622 [1 1] of Fusarium vanettenii CBS:102824 [3] CBS:114067 culture-collection CBS:114067 [8 3 1] of Fusarium samuelsii CBS:115658 culture-collection CBS:115658 [16 11 5] of Fusarium noneumartii
CBS:119600 [12 11 8] CBS:119601 [4 2] CBS:123846 culture-collection CBS:123846 [7 3 1] of Fusarium silvicola CBS:124755 [1]
CBS:126407 culture-collection CBS:126407 [10 5 1] of Fusarium ngaiotongaense CBS:130325 culture-collection CBS:130325 [7 3 1] of Fusarium oblongum CBS:131752 [3] CBS:141.90 culture-collection CBS:141.90 [7 3 1] of Fusarium quercinum
CBS:143038 [4] CBS:144.25 culture-collection CBS:144.25 [8 3 3] of Fusarium bostrycoides CBS:144386 culture-collection CBS:144386 [8 3 3] of Fusarium crassum CBS:144387 culture-collection CBS:144387 [4] of Fusarium breve
CBS:144390 culture-collection CBS:144390 [7 3 1] of Fusarium diminutum CBS:145461 culture-collection CBS:145461 [7 3 1] of Fusarium acutisporum CBS:145464 [2] CBS:145466 [2]
CBS:145473 culture-collection CBS:145473 [3 2 1] of Fusarium venezuelense CBS:190.35 [4 2] CBS:202.32 culture-collection CBS:202.32 [10 4 1] of Fusarium amplum CBS:203.31 [4]
CBS:204.31 culture-collection CBS:204.31 [8 4 3] of Fusarium breviconum CBS:225.58 [4] CBS:230.34 culture-collection CBS:230.34 [10 5 1] of Fusarium regulare CBS:239.39 [3]
CBS:353.87 [3] CBS:354.87 [4] CBS:392.66 [3] CBS:410.62 [3 2]
CBS:466.70 [4] CBS:487.76 culture-collection CBS:487.76 [6 3 1] of Fusarium paraeumartii CBS:616.66 culture-collection CBS:616.66 [7 3 1] of Fusarium cucurbiticola CBS:833.97 [4]
CPC:28194 [1 2] CPC:28195 [1] MUT<ITA>:1863 [1] NRRL:22820 [1 1]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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