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Taxonomy browser (Ruegeria)

Ruegeria

Taxonomy ID: 97050 (for references in articles please use NCBI:txid97050)
current name
Ruegeria Uchino et al. 1999 in [Validation List No. 68 (1999)]
homotypic synonym:
Ruegeria Uchino et al. 1999 emend. Martens et al. 2006, emended name 1)
Ruegeria Uchino et al. 1999 emend. Yi et al. 2007, emended name 2)
Ruegeria Uchino et al. 1999 emend. Wirth and Whitman 2018, emended name 3) in [Wirth JS & Whitman WB (2018)]
NCBI BLAST name: a-proteobacteria
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Silicibacter Petursdottir and Kristjansson 1999 in [Validation List No. 71 (1999)]
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 13,645 19
Protein 661,974 13,920
Structure 91 -
Genome 18 1
Popset 201 199
GEO Datasets 116 -
PubMed Central 1,365 1,363
Gene 33,589 -
SRA Experiments 374 6
Protein Clusters 6,519 1,156
Identical Protein Groups 587,416 13,917
BioProject 134 1
BioSample 804 6
Assembly 384 -
PubChem BioAssay 3 -
Taxonomy 873 1

Notes:

Comments and References:

Validation List No. 68 (1999)
VALIDATION LIST No. 68. Int. J. Syst. Bacteriol. (1999) 49(1):1-3.
Wirth JS & Whitman WB (2018), PubMed: abstract
Wirth, J.S., and Whitman, W.B. "Phylogenomic analyses of a clade within the roseobacter group suggest taxonomic reassignments of species of the genera Aestuariivita, Citreicella, Loktanella, Nautella, Pelagibaca, Ruegeria, Thalassobius, Thiobacimonas and Tropicibacter, and the proposal of six novel genera." Int. J. Syst. Evol. Microbiol. (2018) 68(7):2393-2411.
Validation List No. 71 (1999)
VALIDATION LIST No. 71. Int. J. Syst. Bacteriol. (1999) 49(4):1325-1326.
Ruegeria (LPSN link)
Silicibacter (LPSN link)
Martens T et al. (2006)
Martens, T., Heidorn, T., Pukall, R., Simon, M., Tindall, B.J., and Brinkhoff, T. "Reclassification of Roseobacter gallaeciensis Ruiz-Ponte et al. 1998 as Phaeobacter gallaeciensis gen. nov., comb. nov., description of Phaeobacter inhibens sp. nov., antibiotic-producing members of the Roseobacter clade, reclassification of Ruegeria algicola (Lafay et al. 1995) Uchino et al. 1998 as Marinovum algicola gen. nov., comb. nov., and emended descriptions of the genera Roseobacter, Ruegeria and Leisingera." Int. J. Syst. Evol. Microbiol. (2006) 56:1293-1304.
Petursdottir SK & Kristjansson JK (1997)
Petursdottir, S.K., and Kristjansson, J.K. "Silicibacter lacuscaerulensis gen. nov., sp. nov., a mesophilic moderately halophilic bacterium characteristic of the Blue Lagoon geothermal lake in Iceland." Extremophiles (1997) 1:94-99.
Uchino Y et al. (1998)
Uchino, Y., Hirata, A., Yokota, A., and Sugiyama, J. "Reclassification of marine Agrobacterium species: proposals of Stappia stellulata gen. nov., comb. nov., Stappia aggregata sp. nov., nom. rev., Ruegeria atlantica gen. nov., comb. nov., Ruegeria gelatinovora comb. nov., Ruegeria algicola comb. nov., and Ahrensia kieliense gen. nov., sp. nov., nom. rev." J. Gen. Appl. Microbiol. (1998) 44:201-210.
Yi H et al. (2007b)
Yi, H., Lim, Y.W., and Chun, J. "Taxonomic evaluation of the genera Ruegeria and Silicibacter: a proposal to transfer the genus Silicibacter Petursdottir and Kristjansson 1999 to the genus Ruegeria Uchino et al. 1999." Int. J. Syst. Evol. Microbiol. (2007) 57(4):815-819.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Ruegeria taxonomy/phylogenetic Encyclopedia of life
8 records from this provider organism-specific Integrated Microbial Genomes
Ruegeria taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
2 records from this provider taxonomy/phylogenetic Ocean Biogeographic Information System
2 records from provider taxonomy/phylogenetic World Register of Marine Species
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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