Taxonomy browser (Shewanella woodyi)

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Taxonomy browser (Shewanella woodyi)

Shewanella woodyi

Taxonomy ID: 60961 (for references in articles please use NCBI:txid60961)

current name

Shewanella woodyi Makemson et al. 1997

type strain of Shewanella woodyi: ATCC :51908, CIP:105547, DSM :12036, personal::MS32

homotypic synonym:

Shewanella woodyi Makemson et al. 1997 emend. Thorell et al. 2019, emended name¹⁾

Shewanella woodyi Makemson et al. 1997 emend. Cao et al. 2021, emended name²⁾ in [Cao WR et al. (2021)]

NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage( full ): cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	457	319	10
Protein	13,127	7,823	-
Structure	2	2	-
Genome	1	1	-
Popset	2	2	-
GEO Datasets	3	-	-
PubMed Central	137	137	-
Gene	5,098	1	-
SRA Experiments	5	-	-
Protein Clusters	2,464	2,464	-
Identical Protein Groups	8,813	8,237	-
BioProject	5	3	-
BioSample	5	2	1
Assembly	3	2	-
Taxonomy	2	1	-

Notes:

1) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.
2) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.

Comments and References:

Cao WR et al. (2021), PubMed: abstract

Cao, W.-R., Li, X., Sun, Y.-Y., Jiang, M.-Y., Xu, X.-D., and Li, Y.-J. "Shewanella nanhaiensis sp. nov., a marine bacterium isolated from sediment of South China Sea, and emended descriptions of Shewanella woodyi, Shewanella hanedai and Shewanella canadensis." Int. J. Syst. Evol. Microbiol. (2021) 71(12):005152.

Makemson JC et al. (1997)

Makemson, J.C., Fulayfil, N.R., Landry, W., Van Ert, L.M., Wimpee, C.F., Widder, E.A., and Case, J.F. "Shewanella woodyi sp. nov., an exclusively respiratory luminous bacterium isolated from the Alboran Sea." Int. J. Syst. Bacteriol. (1997) 47(4):1034-1039.

Thorell K et al. (2019)

Thorell, K., Meier-Kolthoff, J.P., Sjöling, Å, and Martín-Rodríguez, A.J. "Whole-genome sequencing redefines Shewanella taxonomy." Front. Microbiol. (2019) 10:1861.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Shewanella woodyi	meta-databases	BacDive
Shewanella woodyi Makemson et al. 1997	taxonomy/phylogenetic	Encyclopedia of life
Show Biotic Interactions	taxonomy/phylogenetic	Global Biotic Interactions
Shewanella woodyi	culture/stock collections	Global Catalogue of Microorganisms
2905579459: Shewanella woodyi Alg231_23	organism-specific	Integrated Microbial Genomes
Shewanella woodyi Makemson, Fulayfil, Landry, Van Ert, Wimpee, Widder & Case, 1997	taxonomy/phylogenetic	Ocean Biogeographic Information System
Shewanella woodyi Makemson, Fulayfil, Landry, Van Ert, Wimpee, Widder & Case, 1997	taxonomy/phylogenetic	World Register of Marine Species

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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