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Taxonomy browser (Photobacterium damselae)

Photobacterium damselae

Taxonomy ID: 38293 (for references in articles please use NCBI:txid38293)
current name
Photobacterium damselae corrig. (Love et al. 1982) Smith et al. 1991 in [Trüper HG & De'clari L (1997)]
basionym:
Vibrio damsela Love et al. 1982 in [Validation List No. 8 (1982)]
type strain of Vibrio damsela: ATCC:33539, CAIM:331, CCUG:13626, CDC:2588-80, CIP:102761, DSM:7482, IFO:15633, BCCM/LMG:7892, NBRC:15633, NCTC:11647
homotypic synonym:
"Vibrio damsela" Love et al. 1981 in [Love M et al. (1981)]
Vibrio damselae corrig. Love et al. 1982 in [Vibrio damselae corrig.]
homotypic synonym:
Photobacterium damsela (Love et al. 1982) Smith et al. 1991 in [Smith SK et al. (1991)]
homotypic synonym:
Listonella damsela (Love et al. 1982) MacDonell and Colwell 1986 in [Validation List No. 20 (1986)]
homotypic synonym:
Listonella damselae corrig. (Love et al. 1982) MacDonell and Colwell 1986, orth. var. in [Listonella damselae corrig.]
"Listonella damsela" (Love et al. 1982) MacDonell and Colwell 1985 in [MacDonell M & Colwell R (1985)]
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Photobacterium histaminum Okuzumi et al. 1994 in [Okuzumi M et al. (1994)]
type strain of Photobacterium histaminum: JCM:8968, personal::C-8, ATCC:51805
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 14,590 5,403 443
Protein 306,855 141,268 -
Structure 7 5 -
Genome 1 1 -
Popset 77 71 -
PubMed Central 952 846 -
Gene 17,947 8,201 -
SRA Experiments 57 19 -
Protein Clusters 2,426 2,426 -
Identical Protein Groups 112,217 92,590 -
BioProject 66 21 -
BioSample 147 64 -
Assembly 98 34 -
PubChem BioAssay 1 - -
Taxonomy 7 1 -

Comments and References:
Trüper HG & De'clari L (1997)
Trüper, H.G., and De'clari, L. "Taxonomic note: Necessary correction of specific epithets formed as substantives (nouns) 'in apposition'." Int. J. Syst. Evol. Microbiol. (1997) 47(3):908-909.
Validation List No. 8 (1982)
VALIDATION LIST No. 8. Int. J. Syst. Bacteriol. (1982) 32(2):266-268.
Love M et al. (1981), PubMed: abstract
Love, M., Teebken-Fisher, D., Hose, J.E., Farmer III, J.J., Hickman, F.W., and Fanning, G.R. "Vibrio damsela a marine bacterium, causes skin ulcers on the damselfish Chromis punctipinnis." Science (1981) 214(4525):1139-40.
Vibrio damselae corrig.
Name has been corrected in the LPSN database but without publication elsewhere.
Smith SK et al. (1991), PubMed: abstract
Smith, S.K., Sutton, D.C., Fuerst, J.A., and Reichelt, J.L. "Evaluation of the genus Listonella and reassignment of Listonella damsela (Love et al.) MacDonell and Colwell to the genus Photobacterium as Photobacterium damsela comb. nov. with an emended description." Int. J. Syst. Bacteriol. (1991) 41(4):529-34.
Validation List No. 20 (1986)
VALIDATION LIST No. 20. Int. J. Syst. Bacteriol. (1986) 36:354-356. [Erratum. Int. J. Syst. Bacteriol. (1989) 39:206.]
Listonella damselae corrig.
Name has been corrected in the LPSN database but without publication elsewhere.
MacDonell M & Colwell R (1985)
MacDonell, M.T., and Colwell, R.R. "Phylogeny of the Vibrionaceae, and recommendation for two new genera, Listonella and Shewanella." Syst. Appl. Microbiol. (1985) 6(2):171-182.
Okuzumi M et al. (1994)
Okuzumi, M., Hiraishi, A., Kobayashi, T., and Fujii, T. "Photobacterium histaminum sp. nov., a histamine-producing marine bacterium." Int. J. Syst. Bacteriol. (1994) 44(4):631-636.
Kimura B et al. (2000)
Kimura, B., Hokimoto, S., Takahashi, H., and Fujii, T. "Photobacterium histaminum Okuzumi et al. 1994 is a later subjective synonym of Photobacterium damselae subsp. damselae (Love et al. 1981) Smith et al. 1991." Int. J. Syst. Evol. Microbiol. (2000) 50:1339-1342.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Photobacterium damselae meta-databases BacDive
Photobacterium damsela taxonomy/phylogenetic Encyclopedia of life
GOLD Multi-Isolate Organism: Go0367021 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Photobacterium damselae culture/stock collections Global Catalogue of Microorganisms
8 records from this provider organism-specific Integrated Microbial Genomes
Photobacterium damsela Love, Teebken-Fisher, Hose, Farmer III, Hickman & Fanning, 1981 taxonomy/phylogenetic Ocean Biogeographic Information System
Photobacterium damsela Love, Teebken-Fisher, Hose, Farmer III, Hickman & Fanning, 1981 taxonomy/phylogenetic World Register of Marine Species
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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