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Taxonomy browser (Geobacillus thermodenitrificans)

Geobacillus thermodenitrificans

Taxonomy ID: 33940 (for references in articles please use NCBI:txid33940)
current name
Geobacillus thermodenitrificans (Manachini et al. 2000) Nazina et al. 2001 emend. Coorevits et al. 2012
basionym:
Bacillus thermodenitrificans (ex Klaushofer and Hollaus 1970) Manachini et al. 2000
type strain of Bacillus thermodenitrificans: ATCC:29492, BGSC:94A1, DSM:465, BCCM/LMG:17532, personal::R-35647
homotypic synonym:
"Bacillus thermodenitrificans" Klaushofer and Hollaus 1970, effective name 1)
Geobacillus thermodenitrificans (Manachini et al. 2000) Nazina et al. 2001 emend. Cihan et al. 2011
includes:
Bacillus sp. BGSC W9A21
Bacillus sp. BGSC W9A45
Bacillus sp. BGSC W9A5
Bacillus sp. BGSC W9A54
Bacillus sp. BGSC W9A65
Bacillus sp. BGSC W9A66
Bacillus sp. BGSC W9A67
Bacillus sp. BGSC W9A69
Bacillus sp. BGSC W9A71
Bacillus sp. BGSC W9A73
Bacillus sp. BGSC W9A74
Bacillus sp. BGSC W9A86
Bacillus sp. BGSC W9A87
Bacillus sp. BGSC W9A91
Geobacillus sp. A333
Geobacillus sp. F84a
Geobacillus sp. G11MC16
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Bacillales; Bacillaceae; Geobacillus
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 1,653 1,450 180
Protein 32,855 28,884 -
Structure 66 20 -
Genome 1 1 -
Popset 29 29 -
PubMed Central 488 488 -
Gene 10,938 3,585 -
SRA Experiments 8 7 -
Protein Clusters 539 539 -
Identical Protein Groups 14,347 13,540 -
BioProject 13 10 -
BioSample 19 16 2
Assembly 14 12 -
Taxonomy 5 1 -

Notes:

Comments and References:

Blanc M et al. (1997)
Blanc, M., Marilley, L., Beffa, T., and Aragno, M. "Rapid identification of heterotrophic, thermophilic, spore-forming bacteria isolated from hot composts." Int. J. Syst. Bacteriol. (1997) 47:1246-1248.
Cihan AC et al. (2011)
Cihan, A.C., Ozcan, B., Tekin, N., and Cokmus, C. "Geobacillus thermodenitrificans subsp. calidus, subsp. nov., a thermophilic and [alpha]-glucosidase producing bacterium isolated from Kizilcahamam, Turkey." J. Gen. Appl. Microbiol. (2011) 57:83-92.
Coorevits A et al. (2012)
Coorevits, A., Dinsdale, A.E., Halket, G., Lebbe, L., De Vos, P., Van Landschoot, A., and Logan, N.A. "Taxonomic revision of the genus Geobacillus: emendation of Geobacillus, G. stearothermophilus, G. jurassicus, G. toebii, G. thermodenitrificans and G. thermoglucosidans (nom. corrig., formerly 'thermoglucosidasius'); transfer of Bacillus thermantarcticus to the genus as G. thermantarcticus comb. nov.; proposal of Caldibacillus debilis gen. nov., comb. nov.; transfer of G. tepidamans to Anoxybacillus as A. tepidamans comb. nov.; and proposal of Anoxybacillus caldiproteolyticus sp. nov." Int. J. Syst. Evol. Microbiol. (2012) 62:1470-1485.
De Vos P & Truper HG (2000m)
De Vos, P., and Truper, H.G. "Judicial Commission of the International Committee on Systematic Bacteriology IXth International (IUMS) Congress of Bacteriology and Applied Microbiology. Minutes of the meetings, 14, 15 and 18 August 1999, Sydney, Australia." Int. J. Syst. Evol. Microbiol. (2000) 50:2239-2244. (Note: This new combination may not be validly published due to the fact that the type strain was not deposited in culture collections in two different countries as required by the emended Bacteriological Code described by De Vos & Truper. However, depostion in a culture collection in another country is documented. Euzeby and Tindall propose a solution for the valid publication of this species.)
Euzeby JP & Tindall BJ (2004)
Euzeby, J.P. and Tindall, B.J. "Status of strains that contravene Rules 27(3) and 30 of the Bacteriological Code. Request for an Opinion." Int. J. Syst. Evol. Microbiol. (2004) 54:293-301. Published online 21 November 2003: DOI 10.1099/ijs.0.03022-0
Klaushofer H & Hollaus F (1970)
Klaushofer, H., and Hollaus, F. "Zur Taxonomie der hochthermophilen, in Zuckerfabriksäften vorkommenden aeroben Sporenbildner." Z. Zuckerind. (1970) 20:465-470. [No PubMed record available.]
List of Changes in Taxonomic Opinion No. 15 (2012)
Euzeby, J.P. "Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2012) 62:7.
Manachini PL et al. (2000)
Manachini, P.L., Mora, D., Nicastro, G., Parini, C., Stackebrandt, E., Pukall, R., Fortina, M.G. "Bacillus thermodenitrificans sp. nov., nom. rev." Int. J. Syst. Evol. Microbiol. (2000) 50:1331-1337.
Nazina TN et al. (2001)
Nazina, T.N., Tourova, T.P., Poltaraus, A.B., Novikova, E.V., Grigoryan, A.A., Ivanova, A.E., Lysenko, A.M., Petrunyaka, V.V., Osipov, G.A., Belyaev, S.S., and Ivanov, M.V. "Taxonomic study of aerobic thermophilic bacilli and descriptions of Geobacillus subterraneus gen. nov., sp. nov. and Geobacillus uzenensis sp. nov. from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermoglucosidasius and Bacillus thermodenitrificans to Geobacillus as the new combinations G. stearothermophilus, G. thermocatenulatus, G. thermoleovorans, G. kaustophilus, G. thermoglucosidasius and G. thermodenitrificans." Int. J. Syst. Evol. Microbiol. (2001) 51:433-466.
Rainey FA et al. (1994b)
Rainey, F.A., Fritze, D., and Stackebrandt, E. "The phylogenetic diversity of thermophilic members of the genus Bacillus as revealed by 16S rDNA analysis." FEMS Microbiol. Lett. (1994) 115:205-211.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Geobacillus thermodenitrificans meta-databases BacDive
4 records from this provider organism-specific BioCyc
Geobacillus thermodenitrificans (Manachini et al. 2000) Nazina et al. 2001 taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Genomes On Line Database
Geobacillus thermodenitrificans culture/stock collections Global Catalogue of Microorganisms
5 records from provider organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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