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Taxonomy browser (Mycobacterium shimoidei)

Mycobacterium shimoidei

Taxonomy ID: 29313 (for references in articles please use NCBI:txid29313)
current name
Mycobacterium shimoidei
homotypic synonym:
"Mycobacterium shimoidei" Tsukamura et al. 1975, effective name 1)
Mycobacterium shimoidei (ex Tsukamura et al. 1975) Tsukamura 1982 emend. Nouioui et al. 2018 (ex Tsukamura et al. 1975) Tsukamura 1982, emended name in [Nouioui I et al. (2018c)]
type strain of Mycobacterium shimoidei (ex Tsukamura et al. 1975) Tsukamura 1982 emend. Nouioui et al. 2018: ATCC:27962, CCUG:37517, DSM:44152, JCM:12376, personal::E4796
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium
   Entrez records   
Database name Direct links Links from type
Nucleotide 340 139
Protein 19,959 -
Genome 1 -
Popset 15 -
PubMed Central 41 -
SRA Experiments 3 -
Identical Protein Groups 8,662 -
BioProject 7 -
BioSample 10 4
Assembly 4 -
PubChem BioAssay 1 -
Taxonomy 1 -

Notes:

Comments and References:
Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
Tsukamura M et al. (1975)
Tsukamura, M., Shimoide, H., and Schaefer, W.B. "A possible pathogen of Group I11 mycobacteria." J. Gen. Microbiol. (1975) 88:377-380. [No abstract available.]
Tsukamura M (1982)
Tsukamura, M. "Mycobacterium shimoidei sp. nov., nom. rev., a lung pathogen." Int. J. Syst. Bacteriol. (1982) 32:67-69. [Erratum: Int. J. Syst. Evol. Microbiol. (1982) 32:469.] [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Mycobacterium shimoidei meta-databases BacDive
2 records from this provider organism-specific BioCyc
Mycobacterium shimoidei (ex Tsukamura et al. 1975) Tsukamura, 1982 taxonomy/phylogenetic Encyclopedia of life
GOLD Multi-Isolate Organism: Go0351576 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Mycobacterium shimoidei culture/stock collections Global Catalogue of Microorganisms
2 records from this provider organism-specific Integrated Microbial Genomes
Mycobacterium shimoidei taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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