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Taxonomy browser (Streptomyces violaceoruber)

Streptomyces violaceoruber

Taxonomy ID: 1935 (for references in articles please use NCBI:txid1935)
current name
Streptomyces violaceoruber (Waksman and Curtis 1916) Pridham 1970 (Approved Lists 1980) in [Skerman VBD et al. (1980)]
type strain of Streptomyces violaceoruber: ATCC:14980, ATCC:19816, ATCC:3355, CBS:569.68, BCRC:11489, DSM:40049, IFO:12826, NBRC:12826, JCM:4423, KCTC:9787, NRRL:B-12594, NRRL:B-2935, NRRL:B-3025, NRRL:B-3319, NRRL-ISP:5049, RIA:1096, UNIQEM:203, VKM:Ac:726, ISP:5049, CGMCC:4.1801, BCCM/LMG:20256
not considered type of Streptomyces violaceoruber: JCM:4223
basionym:
"Actinomyces violaceus-ruber" (sic) Waksman and Curtis 1916, effective name
homotypic synonym:
Streptomyces violaceoruber (Waksman and Curtis 1916) Pridham 1970 (Approved Lists 1980) emend. Komaki 2022, emended name in [Komaki H (2022)]
homotypic synonym:
"Streptomyces violaceoruber" Waksman in Kutzner and Waksman 1959, effective name 1)
equivalent:
Streptomyces violaceiruber
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Streptomyces violaceus-ruber" (sic) (Waksman and Curtis 1916) Pridham 1970, effective name 2)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces violaceoruber group
   Entrez records   
Database name Direct links Links from type
Nucleotide 1,844 645
Protein 32,742 -
Structure 7 -
Genome 1 -
Popset 24 -
PubMed Central 161 -
Gene 6,981 -
SRA Experiments 3 -
Protein Clusters 1 -
Identical Protein Groups 27,624 -
BioProject 9 -
BioSample 21 3
Assembly 5 -
Taxonomy 1 -

Notes:

Comments and References:
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Komaki H (2022), PubMed: abstract
Komaki, H. "Resolution of housekeeping gene sequences used in MLSA for the genus Streptomyces and reclassification of Streptomyces anthocyanicus and Streptomyces tricolor as heterotypic synonyms of Streptomyces violaceoruber." Int. J. Syst. Evol. Microbiol. (2022) 72(5):005370.
Kutzner HJ & Waksman SA (1959)
Kutzner, H.J., and Waksman, S.A. "Streptomyces coelicolor Muller and Streptomyces violaceoruber Waksman and Curtis, two distinctly different organisms." J. Bacteriol. (1959) 78:528-538. [No abstract available.]
Pridham TG (1970)
Pridham, T.G. "New names and new combinations in the order Actinomycetales Buchanan 1917." U.S. Dept. Agric. Tech. Bull. (1970) 1424:1-55. [No PubMed record available.]
Shirling EB & Gottlieb D (1968)
Shirling, E.B., and Gottlieb, D. "Cooperative description of type cultures of Streptomyces. II. Species descriptions from first study." Int. J. Syst. Bacteriol. (1968) 18(2):69-189. [No PubMed record available.]
Waksman SA & Curtis R (1916)
Waksman, S.A., and Curtis, R. "The Actinomyces of the soil." Soil Sci. (1916) 1:99-134. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Streptomyces violaceoruber meta-databases BacDive
2 records from this provider organism-specific BioCyc
Streptomyces violaceoruber (Waksman and Curtis 1916) Pridham 1970 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Streptomyces violaceoruber culture/stock collections Global Catalogue of Microorganisms
3 records from provider organism-specific Integrated Microbial Genomes
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

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strain
1147 [1 5] 14980 [1 1] 15890 [1 1] 2-7 [1 1]
2917 [1 1] 3355 [1 1] 3844-33C [1 20] 43362 [1 1]
A36 [1 394 1] BCX-31 [1 1] BCX-44 [1 1] BS26 [1]
BUCBT-23 [1] CGMCC 4.1801 [1 2 7526] DA1 [1] DSM 40049 [12 10 9]
DSM 40783 [9 9 8] EA128 [1] EA169 [1] FK-187 [1]
GYB13 [1] HBUM49432 [1 1] ICSSB 1016 [1 1] ICSSB 1018 [1 1]
JCM 4423 [1 612 7584] JCM4423 [1 1] K136 [1 1] K137 [1 1]
KCTC 9787 [1 1] KS487 [1 1] LZ-26-1 [8 8] NBRC 12826 [1 7 5]
NBRC 13385 [1 5 4] NBRC 15146 [1 1] NBRC 15731 [1 2 1] NBRC 15732 [1 3 2]
NBRC 3114 [1 1] NBRC 3176 [1 1] NBRC 3504 [1 1] NDL Uz-85 [1]
NEAE-99 [1] NIOT_ MBAMS85 [1] NRRL B-12000 [1 10] NRRL B-1257 [1 1 1]
NRRL B-1578 [1 1 1] NRRL B-2787 [1 1 1] NRRL B-2935 [6 6 6] NRRL B-3025 [1 1 1]
NRRL B-3319 [1 1] NRRL B-3631 [1 7] NRRL S-12 [1 342] NRRL S-981 [1 352]
PB [1] PKS-1 [1] R6 [1] S11 [1 1]
S21 [1 1 2 6571] S5 [1] SAK-30 [1] SANK95570 [1 3 113]
SC02 [1] STP1 [1] STP10 [1] STP2 [1]
STP3 [1] SYA3 [1] SYP-A7284 [1] Tu22 [4 57]
Tue22 [1 6] UAE1 [1] VS25_R [1] WAS051 [1]
WLD132 [1] Z12-1 [1] ZHY122 [1] ZT1 [1]
vlk-4 [1]
isolate
CSSP162 [1 1] CSSP163 [1 1] CSSP679 [1 1] ES [1]
culture-collection
JCM:4423 [1 611 7584] NRRL:S-12 [1 342] NRRL:S-981 [1 352]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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