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Taxonomy browser (Dickeya fangzhongdai)

Dickeya fangzhongdai

Taxonomy ID: 1778540 (for references in articles please use NCBI:txid1778540)
current name
Dickeya fangzhongdai Tian et al. 2016
type strain of Dickeya fangzhongdai: personal::JS5, CGMCC:1.15464, DSM:101947
includes:
Dickeya sp. B16
Dickeya sp. JS5
Dickeya sp. LN1
Dickeya sp. PA1
Dickeya sp. QZH3
Dickeya sp. NIB Z 2098
Dickeya sp. NIB Z 2099
Dickeya sp. S1
NCBI BLAST name: enterobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Dickeya
   Entrez records   
Database name Direct links Links from type
Nucleotide 1,257 108
Protein 94,481 -
Genome 1 -
Popset 28 -
PubMed Central 26 -
Gene 8,938 -
SRA Experiments 13 -
Identical Protein Groups 31,105 -
BioProject 18 -
BioSample 28 2
Assembly 22 -
Taxonomy 1 -

Comments and References:

Alic S et al. (2015)
Alic, S., Naglic, T., Llop, P., Toplak, N., Koren, S., Ravnikar, M., and Dreo, T. "Draft genome sequences of Dickeya sp. isolates B16 (NIB Z 2098) and S1 (NIB Z 2099) causing soft rot of Phalaenopsis orchids." Genome Announc. (2015) 3:e00973-15.
Tian Y et al. (2016)
Tian, Y., Zhao, Y., Yuan, X., Yi, J., Fan, J., Xu, Z., Hu, B., De Boer, S.H., and Li, X. "Dickeya fangzhongdai sp. nov., a plant-pathogenic bacterium isolated from pear trees (Pyrus pyrifolia)." Int. J. Syst. Evol. Microbiol. (2016) 66:2831-2835.
Zhao Y et al. (2018)
Zhao, Y., Tian, Y., Li, X., and Hu, B. "Complete genome sequence of a Dickeya fangzhongdai type strain causing bleeding canker of pear tree trunks." Genome Announc. (2018) 6:e00177-18.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Dickeya fangzhongdai meta-databases BacDive
6 records from this provider organism-specific BioCyc
GOLD: Go0408801 organism-specific Genomes On Line Database
7 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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