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Taxonomy browser (Orientia tsutsugamushi str. Karp)

Orientia tsutsugamushi str. Karp

Taxonomy ID: 1359185 (for references in articles please use NCBI:txid1359185)
current name
Orientia tsutsugamushi str. Karp
NCBI BLAST name: a-proteobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Orientia; Orientia tsutsugamushi
   Entrez records   
Database name Direct links Links from type
Nucleotide 409 409
Protein 2,305 -
Genome 1 -
Popset 1 -
Gene 2,064 -
SRA Experiments 8 -
Identical Protein Groups 3,120 -
BioProject 3 -
BioSample 9 8
Assembly 3 -
Taxonomy 1 -

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Liao HM et al. (2016)
Liao, H-.M., Chao, C.-C., Lei, H., Li, B., Tsai, S., Hung, G.-C., Ching, W.-M., and Lo, S.-C. "Genomic sequencing of Orientia tsutsugamushi strain Karp, an assembly comparable to the genome size of the strain Ikeda." Genome Announc. (2016) 4:e00702-16.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
GOLD: Go0044799 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2 records from provider organism-specific Integrated Microbial Genomes
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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