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Taxonomy browser (Histoplasma capsulatum)

Histoplasma capsulatum

Taxonomy ID: 5037 (for references in articles please use NCBI:txid5037)
current name
Histoplasma capsulatum Darling, 1906
homotypic synonym:
Cryptococcus capsulatus (Darling) Castell. & Chalm., 1919
NCBI BLAST name: ascomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic synonym
Emmonsiella capsulata Kwon-Chung, 1972
culture from holotype of Emmonsiella capsulata: CBS:136.72
type material of Emmonsiella capsulata: ATCC:22635
homotypic synonym:
Ajellomyces capsulatus (Kwon-Chung) McGinnis & Katz, 1979
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 39,491 29,575 -
Protein 76,865 20,404 -
Structure 2 1 -
Genome 1 1 -
Popset 80 79 -
GEO Datasets 413 413 -
PubMed Central 5,504 5,489 -
Gene 9,365 1 -
SRA Experiments 244 229 -
Identical Protein Groups 45,682 18,662 -
BioProject 41 33 -
BioSample 221 200 2
Assembly 10 3 -
PubChem BioAssay 68 68 -
Taxonomy 8 1 -

Comments and References:

image:Histoplasma capsulatum
Ocansey BK et al. (2022), doi:10.1371/journal.pntd.0010111
Ocansey BK, Kosmidis C, Agyei M, Dorkenoo AM, Ayanlowo OO, Oladele RO, Darre T, Denning DW. 2022. Histoplasmosis in Africa: Current perspectives, knowledge gaps, and research priorities. PLoS Negl Trop Dis 16(2):e0010111.

Genome Information

Go to NCBI genomic BLAST page for Histoplasma capsulatum

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
GOLD: 2 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2 records from this provider taxonomy/phylogenetic Index Fungorum
2 records from this provider taxonomy/phylogenetic MycoBank
fungal-III (genome proposal) taxonomy/phylogenetic NHGRI genome proposal white papers
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
2 records from this provider taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
4 records from provider organism-specific diArk - a resource for eukaryotic genome research
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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