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Taxonomy browser (Plenodomus lingam)

Plenodomus lingam

Taxonomy ID: 5022 (for references in articles please use NCBI:txid5022)
current name
Plenodomus lingam (Tode) Höhn., 1911 1)
basionym:
Sphaeria lingam Tode, 1791
epitype of Sphaeria lingam: CBS:H-24655
culture from epitype of Sphaeria lingam: CBS:260.94
homotypic synonym:
Phoma lingam (Tode) Desm., 1849
Genbank common name: blackleg of rapeseed fungus
NCBI BLAST name: ascomycete fungi
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
heterotypic synonym
Plenodomus rabenhorstii Preuss, 1851
heterotypic synonym
Leptosphaeria maculans Cesati & De Notaris, 1863
includes:
Leptosphaeria sp. JW-2011m
common name(s) blackleg of canola fungus, blackleg of crucifers fungus
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; dothideomyceta; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Leptosphaeriaceae; Plenodomus; Plenodomus lingam/Leptosphaeria maculans species complex
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 55,300 54,951 13
Protein 36,753 24,027 -
Structure 5 3 -
Genome 1 1 -
Popset 62 60 -
GEO Datasets 114 83 -
PubMed Central 1,265 1,265 -
Gene 14,727 11,990 -
SRA Experiments 825 729 -
Identical Protein Groups 20,911 11,961 -
BioProject 33 24 -
BioSample 669 618 1
Assembly 5 3 -
PubChem BioAssay 92 92 -
Taxonomy 5 1 -

Notes:

Comments and References:

de Gruyter J et al. (2013), other link:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3713885/
de Gruyter J, Woudenberg JH, Aveskamp MM, Verkley GJ, Groenewald JZ, Crous PW. 2013. Redisposition of phoma-like anamorphs in Pleosporales. Stud Mycol 75(1):1-36.

Genome Information

Go to NCBI genomic BLAST page for Plenodomus lingam

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Leptosphaeria maculans (Desm.) Ces. & De Not. 1863 taxonomy/phylogenetic Encyclopedia of life
GOLD: 2 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Leptosphaeria maculans culture/stock collections Global Catalogue of Microorganisms
3 records from this provider taxonomy/phylogenetic Index Fungorum
3 records from this provider taxonomy/phylogenetic MycoBank
2 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Leptosphaeria maculans taxonomy/phylogenetic TreeBase
WebScipio: Leptosphaeria maculans organism-specific WebScipio - eukaryotic gene identification
diArk: Leptosphaeria maculans organism-specific diArk - a resource for eukaryotic genome research
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers


Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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