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Taxonomy browser (Candidatus Dependentiae)

Candidatus Dependentiae

Taxonomy ID: 95901 (for references in articles please use NCBI:txid95901)
current name
Candidatus Dependentiae Yeoh et al. 2016
equivalent:
Dependentiae
NCBI BLAST name: bacteria
Rank: clade
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
candidate division 'Torf, mittlere Schicht' 6
heterotypic synonym
candidate division TM6
heterotypic synonym
candidate phylum TM6
heterotypic synonym
domain cluster TM6
Lineage( full )
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla
   Entrez records   
Database name Subtree links Direct links
Nucleotide 3,567 -
Protein 34,248 -
Genome 37 -
Popset 40 39
PubMed Central 41 36
Gene 1,025 -
SRA Experiments 18 -
Identical Protein Groups 119,055 -
BioProject 28 1
BioSample 276 -
Assembly 167 -
Taxonomy 72 1

Comments and References:

Hugenholtz P. et al. (1998b), other link:http://jb.asm.org/cgi/content/full/180/18/4765?view=long&pmid=9733676
Hugenholtz, P., Goebel, B.M., and Pace, N.R. "Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity." J. Bacteriol. (1998) 180:4765-4774. (Erratum: J. Bacteriol. (1998) 180:6793.) [No PubMed abstract available.]
Rheims H et al. (1996)
Rheims, H., Sproer, C., Rainey, F.A., and Stackebrandt, E. "Molecular biological evidence for the occurrence of uncultured members of the actinomycete line of descent in different environments and geographical locations." Microbiology (1996) 142:2863-2870. [Note: origin of 'TM' nomenclature. 'Torf, mittlere Schicht' = 'peat, middle layer']
Yeoh YK et al. (2016)
Yeoh, Y.K., Sekiguchi, Y., Parks, D.H., and Hugenholtz, P. "Comparative genomics of candidate phylum TM6 suggests that parasitism is widespread and ancestral in this lineage." Mol. Biol. Evol. (2016) 33:915-927.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
5 records from this provider organism-specific Integrated Microbial Genomes
Candidatus Dependentiae taxonomy/phylogenetic Lifemap
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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