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Taxonomy browser (Caldithrix abyssi DSM 13497)

Caldithrix abyssi DSM 13497

Taxonomy ID: 880073 (for references in articles please use NCBI:txid880073)
current name
Caldithrix abyssi DSM 13497
equivalent:
Caldithrix abyssi str. DSM 13497
Caldithrix abyssi strain DSM 13497
NCBI BLAST name: bacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Caldithrix abyssi LF13
Lineage( full )
cellular organisms; Bacteria; Calditrichota; Calditrichia; Calditrichales; Calditrichaceae; Caldithrix; Caldithrix abyssi
   Entrez records   
Database name Direct links Links from type
Nucleotide 54 10
Protein 8,971 -
Structure 1 -
Genome 1 -
GEO Datasets 3 -
PubMed Central 2 -
SRA Experiments 4 -
Identical Protein Groups 5,050 -
BioProject 5 -
BioSample 5 2
Assembly 3 2
Taxonomy 1 -

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Kublanov IV et al. (2017)
Kublanov, I.V., Sigalova, O.M., Gavrilov, S.N., Lebedinsky, A.V., Rinke, C., Kovaleva, O., Chernyh, N.A., Ivanova, N., Daum, C., Reddy, T.B.K., Klenk, H.-P., Spring, S., Goker, M., Reva, O.N., Miroshnichenko, M.L., Kyprides, N.C., Woyke, T., Gelfand, M.S., and Bonch-Osmolovskaya, E.A. "Genomic analysis of Caldithrix abyssi, the thermophilic anaerobic bacterium of the novel bacterial phylum Calditrichaeota." Front. Microbiol. (2017) 8:195.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Caldithrix abyssi LF13 meta-databases BacDive
4 records from this provider organism-specific BioCyc
GOLD: Go0003487 organism-specific Genomes On Line Database
3 records from provider organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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