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Taxonomy browser (Pseudomonas meliae)

Pseudomonas meliae

Taxonomy ID: 86176 (for references in articles please use NCBI:txid86176)
current name
Pseudomonas meliae Ogimi 1981
type strain of Pseudomonas meliae: ATCC:33050, CFBP:3225, ICMP:6289, BCCM/LMG:2220, NCPPB:3033, personal::No. 2, CCUG:51503, DSM:6759, MAFF:301463
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 2
   Entrez records   
Database name Direct links Links from type
Nucleotide 1,764 1,758
Protein 7,936 -
Genome 1 -
Popset 8 -
PubMed Central 8 -
Protein Clusters 5 -
Identical Protein Groups 6,805 -
BioProject 2 -
BioSample 2 2
Assembly 2 -
Taxonomy 1 -

Comments and References:

P. ficuserectae = P. amygdali = P. meliae = P. savastanoi
From the LPSN web site: "Pseudomonas ficuserectae Goto 1983, Pseudomonas amygdali Psallidas and Panagopoulos 1975 (Approved Lists 1980), Pseudomonas meliae Ogimi 1981, and Pseudomonas savastanoi (Janse 1982) Gardan et al. 1992 are members of a single genomospecies. Thus, these species should be considered synonymous and the correct name for this species should be Pseudomonas amygdali. Unfortunately, Pseudomonas amygdali, as delineated by DNA-DNA hybridization, could not be differentiated from other genomospecies by phenotypic tests. So the authors [Gardan et al. 1999] do not formally propose nomenclatural changes." [N.B.: See also Gomila M et al. (2017).]
Gardan L et al. (1999)
Gardan, L., Shafik, H., Belouin, S., Broch, R., Grimont, F., and Grimont, P.A.D. "DNA relatedness among the pathovars of Pseudomonas syringae and description of Pseudomonas tremae sp. nov. and Pseudomonas cannabina sp. nov. (ex Sutic and Dowson 1959)." Int. J. Syst. Bacteriol. (1999) 49:469-478. [N.B.: Gardan et al. claim strains CFBP 1660 (pathotype of P. syringae pv. primulae) and CFBP 2348 (pathotype of P. syringae pv. ribicola) are misidentified and should be transferred to Pseudomonas viridiflava.]
Gomila M et al. (2017b), other link:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5725466/
Gomila, M., Busquets, A., Mulet, M., García-Valdés, E., and Lalucat, J. "Clarification of taxonomic status within the Pseudomonas syringae species group based on a phylogenomic analysis." Front. Microbiol. (2017) 8:2422.
Ogimi C (1977)
Ogimi, C. "Studies on bacterial gall of chinaberry (Melia Azedarach Lin.), caused by Pseudomonas meliae n. sp." Bull Coll. Agr., Univ of the Ryukyus (1977) 24:497-556. [No PubMed record available.]
VALIDATION LIST No. 7 (1981)
VALIDATION LIST No. 7. Int. J. Syst. Bacteriol. (1981) 31:382-383.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pseudomonas amygdali meta-databases BacDive
Pseudomonas meliae Ogimi 1981 taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0116227 organism-specific Genomes On Line Database
Pseudomonas meliae culture/stock collections Global Catalogue of Microorganisms
2 records from this provider organism-specific Integrated Microbial Genomes
Pseudomonas meliae taxonomy/phylogenetic Lifemap
Pseudomonas meliae | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Pseudomonas meliae taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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