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Taxonomy browser (Pelagimonas varians)

Pelagimonas varians

Taxonomy ID: 696760 (for references in articles please use NCBI:txid696760)
current name
Pelagimonas varians Hahnke et al. 2013
type strain of Pelagimonas varians: CIP:110297, DSM:23678, BCCM/LMG:26343, personal::SH4-1
homotypic synonym:
"Tropicibacter varians" (Hahnke et al. 2013) Liang et al. 2021, effective name 1) in [Liang KYH et al. (2021)]
includes:
Rhodobacteraceae bacterium SH4-1
NCBI BLAST name: a-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Pelagimonas
   Entrez records   
Database name Direct links Links from type
Nucleotide 239 116
Protein 14,244 -
Genome 1 -
Popset 2 -
PubMed Central 4 -
SRA Experiments 3 -
Identical Protein Groups 5,497 -
BioProject 4 -
BioSample 3 1
Assembly 2 -
Taxonomy 1 -

Notes:

Comments and References:
Liang KYH et al. (2021), doi: 10.3389/fmicb.2021.683109, PubMed: abstract
Liang, K.Y.H., Orata, F.D., Boucher, Y.F., and Case, R.J. "Roseobacters in a sea of poly- and paraphyly: Whole genome-based taxonomy of the family Rhodobacteraceae and the proposal for the split of the 'Roseobacter clade' into a novel family, Roseobacteraceae fam. nov." Front. Microbiol. (2021) 12:683109.
Hahnke S et al. (2013)
Hahnke, S., Tindall, B.J., Schumann, P., Simon, M., and Brinkhoff, T. "Pelagimonas varians gen. nov., sp. nov., isolated from the southern North Sea." Int. J. Syst. Evol. Microbiol. (2013) 63(3):835-843.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pelagimonas varians meta-databases BacDive
GOLD: 2 Organisms organism-specific Genomes On Line Database
2 records from this provider organism-specific Integrated Microbial Genomes
Pelagimonas varians (T) | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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