Link to NCBI Front Page Taxonomy Logo
Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
Taxonomy browser (Xanthomonas citri pv. citri)

Xanthomonas citri pv. citri

Taxonomy ID: 611301 (for references in articles please use NCBI:txid611301)
current name
Xanthomonas citri pv. citri (Hasse 1915) Constantin 2016
homotypic synonym:
"Xanthomonas smithii subsp. citri" (Gabriel et al. 1989) Schaad et al. 2005, effective name 1)
"Xanthomonas smithii subsp. citri" (ex Hasse 1915) Schaad et al. 2005, effective name 2)
Xanthomonas smithii subsp. citri pv. citri
Xanthomonas citri subsp. citri (ex Hasse 1915) Gabriel et al. 1989
NCBI BLAST name: g-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Xanthomonas campestris pv. Citri (A group)
in-part
Xanthomonas campestris pv. citri
Lineage( full )
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas; Xanthomonas citri group; Xanthomonas citri
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 41,466 41,114 2,860
Protein 469,086 449,910 -
Structure 81 - -
Genome 1 1 -
Popset 55 55 -
GEO Datasets 94 39 -
Gene 23,345 9,328 -
SRA Experiments 1,012 974 -
Identical Protein Groups 97,039 95,600 -
BioProject 87 76 -
BioSample 1,071 1,029 4
Assembly 827 823 -
PubChem BioAssay 2 - -
Taxonomy 26 1 -

Notes:

Comments and References:

Constantin EC et al. (2016)
Constantin, E.C., Cleenwerck, I., Maes, M., Baeyen, S., Van Malderghem, C., De Vos, P., and Cottyn, B. "Genetic characterization of strains named as Xanthomonas axonopodis pv. dieffenbachiae leads to a taxonomic revision of the X. axonopodis species complex." Plant Pathol. (2016) 65:792-806. [No PubMed record available.]
Gabriel DW et al. (1989)
Gabriel, D.W., Kingsley, M.T., Hunter, J.E., and Gottwyld, T. "Reinstatement of Xanthomonas citri (ex Hasse) and X. phaseoli (ex Smith) to species and reclassification of all X. campestris pv. citri strains." Int. J. Syst. Bacteriol. (1989) 39:14-22. [No PubMed record available.]
Hasse CH (1915)
Hasse, C.H. "Pseudomonas citri, the cause of citrus canker." J. Agr. Res. (1915) 4:97-100. [No PubMed record available.]
Schaad NW et al. (2005)
Schaad, N.W., Postnikova, E., Lacy, G.H., Sechler, A., Agarkova, I., Stromberg, P.E., Stromberg, V.K., and Vidaver, A.K. "Reclassification of Xanthomonas campestris pv. citri (ex Hasse 1915) Dye 1978 forms A, B/C/D, and E as X. smithii subsp. citri (ex Hasse) sp. nov. nom. rev. comb. nov., X. fuscans subsp. aurantifolii (ex Gabriel 1989) sp. nov. nom. rev. comb. nov., and X. alfalfae subsp. citrumelo (ex Riker and Jones) Gabriel et al., 1989 sp. nov. nom. rev. comb. nov.; X. campestris pv. malvacearum (ex smith 1901) Dye 1978 as X. smithii subsp. smithii nov. comb. nov. nom. nov.; X. campestris pv. alfalfae (ex Riker and Jones, 1935) dye 1978 as X. alfalfae subsp. alfalfae (ex Riker et al., 1935) sp. nov. nom. rev.; and "var. fuscans" of X. campestris pv. phaseoli (ex Smith, 1987) Dye 1978 as X. fuscans subsp. fuscans sp. nov." Syst. Appl. Microbiol. (2005) 28:494-518. (Erratum: Syst. Appl. Microbiol. (2006) 29:690-695.)
Schaad NW et al. (2006), other link:http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B7GVX-4M33W19-1&_user=6129429&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000000150&_version=1&_urlVersion=0&_userid=6129429&md5=dccbb5f6ade8644dc8201459997a77c4
Schaad, N.W., Postnikova, E., Lacy, G., Sechler, A., Agarkova, I., Stromberg, P.E., Stromberg, V.K., and Vidaver, A.K. "Emended classification of xanthomonad pathogens on citrus." Syst. Appl. Microbiol. (2006) 29:690-695. [No abstract available.] (Note: Erratum to Schaad et al. 2005.)
VALIDATION LIST No. 115 (2007) (Xanthomonas citri subsp. citri), other link:https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijs.0.65207-0
Int. J. Syst. Evol. Microbiol. (2007) 57:893-897.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
10 records from this provider organism-specific BioCyc
GOLD: 69 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
74 records from provider organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers



Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


Comments and questions to info@ncbi.nlm.nih.gov

[Help] [Search] [NLM NIH] [Disclaimer]