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Taxonomy browser (Oxalobacter paraformigenes)

Oxalobacter paraformigenes

Taxonomy ID: 556268 (for references in articles please use NCBI:txid556268)
current name
Oxalobacter paraformigenes Chmiel et al. 2023 in [Validation List No. 214 (2023), Chmiel JA et al. (2023)]
type strain of Oxalobacter paraformigenes: personal::HOxBLS, ATCC:TSD-346, DSM:115067
homotypic synonym:
"Oxalobacter paraformigenes" Chmiel et al. 2022, effective name 1) in [Chmiel JA et al. (2022)]
includes:
Oxalobacter formigenes HOxBLS
NCBI BLAST name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter
   Entrez records   
Database name Direct links Links from type
Nucleotide 76 35
Protein 4,601 -
Genome 1 -
PubMed Central 2 -
SRA Experiments 7 -
Identical Protein Groups 2,813 -
BioProject 2 -
BioSample 2 2
Assembly 3 1
Taxonomy 1 -

Notes:

Comments and References:

Validation List No. 214 (2023), PubMed: abstract
Validation List No. 214. "Valid publication of new names and new combinations effectively published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2023) 73(11):006080.
Chmiel JA et al. (2023), doi: 10.3389/fmicb.2023.1231746, PubMed: abstract
Chmiel, J.A., Carr, C., Stuivenberg, G.A., Venema, R., Chanyi, R.M., Al, K.F., Giguere, D., Say, H., Akouris, P.P., Domínguez Romero, S.A., Kwong, A., Tai, V., Koval, S.F., Razvi, H., Bjazevic, J., and Burton, J.P. "Corrigendum: New perspectives on an old grouping: the genomic and phenotypic variability of Oxalobacter formigenes and the implications for calcium oxalate stone prevention." Front. Microbiol. (2023) 14:1231746.
Chmiel JA et al. (2022), doi: 10.3389/fmicb.2022.1011102, PubMed: abstract
Chmiel, J.A., Carr, C., Stuivenberg, G.A., Venema, R., Chanyi, R.M., Al, K.F., Giguere, D., Say, H., Akouris, P.P., Domínguez Romero, S.A., Kwong, A., Tai, V., Koval, S.F., Razvi, H., Bjazevic, J., and Burton, J.P. "New perspectives on an old grouping: The genomic and phenotypic variability of Oxalobacter formigenes and the implications for calcium oxalate stone prevention." Front. Microbiol. (2022) 13:1011102.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Oxalobacter formigenes HOxBLS organism-specific BioCyc
GOLD: Go0002357 organism-specific Genomes On Line Database
646206250: Oxalobacter paraformigenes HOxBLS organism-specific Integrated Microbial Genomes
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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