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Taxonomy browser (Helicobacter japonicus)

Helicobacter japonicus

Taxonomy ID: 425400 (for references in articles please use NCBI:txid425400)
current name
"Helicobacter japonicum" Shen et al. 2016, effective name 1)
type strain of "Helicobacter japonicum": personal::MIT 01-6451, ATCC:TSD-46, BCCM/LMG:28612
includes:
Helicobacter sp. MIT 01-6451
NCBI BLAST name: e-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter
   Entrez records   
Database name Direct links Links from type
Nucleotide 16,442 102
Protein 10,046 -
Genome 1 -
PubMed Central 11 -
Gene 1,946 -
SRA Experiments 2 -
Identical Protein Groups 9,425 -
BioProject 9 -
BioSample 204 1
Assembly 118 1
Taxonomy 1 -

Notes:

Comments and References:

Shen Z et al. (2016b)
Shen, Z., Feng, Y., Muthupalani, S., Sheh, A., Cheaney, L.E., Kaufman, C.A., Gong, G., Paster, B.J., and Fox, J.G. "Novel Helicobacter species H.japonicum isolated from laboratory mice from Japan induces typhlocolitis and lower bowel carcinoma in C57BL/129 IL10-/- mice." Carcinogenesis (2016) 37:1190-1198.
VALIDATION LIST No. 176 (2017)
Validation List No. 176: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2017) 67:2075-2078.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider organism-specific BioCyc
GOLD Multi-Isolate Organism: Go0455462 organism-specific Genomes On Line Database
2791355303: Helicobacter japonicus MIT 01-6451 organism-specific Integrated Microbial Genomes
Helicobacter japonicus taxonomy/phylogenetic Lifemap
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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