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Taxonomy browser (Roseobacter denitrificans OCh 114)

Roseobacter denitrificans OCh 114

Taxonomy ID: 375451 (for references in articles please use NCBI:txid375451)
current name
Roseobacter denitrificans OCh 114
includes:
Erythrobacter sp. OCh114
equivalent:
Roseobacter denitrificans ATCC 33942
Roseobacter denitrificans DSM 7001
Roseobacter denitrificans str. OCh 114
Roseobacter denitrificans strain OCh 114
NCBI BLAST name: a-proteobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Roseobacter; Roseobacter denitrificans
   Entrez records   
Database name Direct links Links from type
Nucleotide 146 102
Protein 9,882 -
Structure 11 -
Genome 1 -
Popset 1 -
GEO Datasets 28 -
PubMed Central 8 -
Gene 4,192 -
SRA Experiments 1 -
Identical Protein Groups 5,447 -
BioProject 6 -
BioSample 2 1
Assembly 2 -
Taxonomy 1 -

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Swingley WD et al. (2007)
Swingley, W.D., Gholba, S., Mastrian, S.D., Matthies, H.J., Hao, J., Ramos, H., Acharya, C.R., Conrad, A.L., Taylor, H.L., Dejesa, L.C., Shah, M.K., O'Huallachain, M.E., Lince, M.T., Blankenship, R.E., Beatty, J.T., and Touchman, J.W. "The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic as opposed to photosynthetic metabolism." J. Bacteriol. (2007) 189:683-690.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Roseobacter denitrificans meta-databases BacDive
2 records from this provider organism-specific BioCyc
GOLD: 2 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2 records from this provider organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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