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Taxonomy browser (Thiomonas delicata)

Thiomonas delicata

Taxonomy ID: 364030 (for references in articles please use NCBI:txid364030)
current name
Thiomonas delicata (Katayama-Fujimura et al. 1984) Kelly and Wood 2006 emend. Battaglia-Brunet et al. 2011
type strain of Thiomonas delicata: DSM:17897, KCTC:2851, NBRC:14566, personal::THI 091
homotypic synonym:
Thiobacillus delicatus (ex Mizoguchi et al. 1976) Katayama-Fujimura et al. 1984
Thiomonas delicata (Katayama-Fujimura et al. 1984) Kelly and Wood 2006 emend. Katayama et al. 2006
NCBI BLAST name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Thiobacillus cuprinus" Huber and Stetter 1990, effective name 1)
heterotypic synonym
"Thiomonas arsenivorans" Battaglia-Brunet et al. 2006, effective name 2)
type strain of "Thiomonas arsenivorans": DSM:16361, BCCM/LMG:22795, personal::b6
heterotypic synonym
Thiomonas cuprina Moreira and Amils 1997 emend. Kelly et al. 2007
type strain of Thiomonas cuprina: DSM:5495, NBRC:102094, NBRC:102145, personal::H5
Lineage( full )
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiales genera incertae sedis; Thiomonas
   Entrez records   
Database name Direct links Links from type
Nucleotide 206 4
Protein 6,442 -
Genome 1 -
Popset 8 -
PubMed Central 38 -
Protein Clusters 3 -
Identical Protein Groups 4,385 -
BioProject 2 -
BioSample 5 4
Assembly 2 -
Taxonomy 1 -

Notes:

Comments and References:

Associate Editor IJSB (1997) (Thiomonas curpina)
Associate Editor, IJSB "Notification that new names and new combinations have appeared in volume 47, No. 2, of the IJSB (footnote d)." Int. J. Syst. Bacteriol. (1997) 47:917-919. [Note: the name is 'sp. nov.' rather than 'comb. nov.']
Battaglia-Brunet F et al. (2006)
Battaglia-Brunet, F., Joulian, C., Garrido, F., Dictor, M.-C., Morin, D., Coupland, K., Johnson, D.B., Halberg, K.B., and Baranger, P. "Oxidation of arsenite by Thiomonas strains and characterization of Thiomonas arsenivorans sp. nov." Antonie van Leeuwenhoek (2006) 89:99-108. Published online 8 December 2005.
Battaglia-Brunet F et al. (2011)
Battaglia-Brunet, F., El Achbouni, H., Quemeneur, M., Hallberg, K.B., Kelly, D.P., and Joulian, C. "Proposal that the arsenite-oxidizing organisms Thiomonas cuprina and 'Thiomonas arsenivorans' be reclassified as strains of Thiomonas delicata, and emended description of Thiomonas delicata." Int. J. Syst. Evol. Microbiol. (2011) 61:2816-2821.
Huber H & Stetter KO (1990)
Huber, H., Stetter, K.O. "Thiobacillus cuprinus sp. nov., a novel facultatively organotrophic metal-mobilizing bacterium." Appl. Environ. Microbiol. (1990) 56:315-322.
Katayama Y et al. (2006)
Katayama, Y., Uchino, Y., Wood, A.P., and Kelly, D.P. "Confirmation of Thiomonas delicata (formerly Thiobacillus delicatus) as a distinct species of the genus Thiomonas Moreira and Amils 1997 with comments on some species currently assigned to the genus." Int. J. Syst. Evol. Microbiol. (2006) 56:2553-2557.
Katayama-Fjuimura Y et al. (1984)
Katayama-Fujimura, Y., Kawashima, I., Tsuzaki, N., and Kuraishi, H. "Physiological characteristics of the facultatively chemolithotrophic Thiobacillus species Thiobacillus delicatus nom. rev., emend., Thiobacillus perometabolis, and Thiobacillus intermedius." Int. J. Syst. Bacteriol. (1984) 34:139-144. [No PubMed record available.]
Kelly DP & Wood AP (2005b)
Kelly, D.P., and Wood, A.P. "Genus Incertae Sedis XVIII. Thiomonas Moreira and Amils 1997, 527VP." In: D.J. Brenner, N.R. Krieg, J.T. Staley and G. M. Garrity (eds), Bergeys Manual of Systematic Bacteriology, second edition, vol. 2 (The Proteobacteria), part C (The Alpha-, Beta-, Delta-, and Epsilonproteobacteria), Springer, New York, 2005, pp. 757-759. [No PubMed record available.]
Kelly DP et al. (2007)
Kelly, D.P., Uchino, Y., Huber, H., Amils, R., and Wood, A.P. "Reassessment of the phylogenetic relationships of Thiomonas cuprina." Int. J. Syst. Evol. Microbiol. (2007) 57:2720-2724.
Mizoguchi T et al. (1976)
Mizoguchi, T., Sato, T., and Okabe, T. "New sulfur-oxidizing bacteria capable of growing heterotrophically, Thiobacillus rubellus nov. sp. and Thiobacillus delicatus nov. sp." J. Ferment. Technol. (1976) 54:181-191. [No PubMed record available.]
Moreira D & Amils R (1997)
Moreira, D., and Amils, R. "Phylogeny of Thiobacillus cuprinus and other mixotrophic thiobacilli: proposal for Thiomonas gen. nov." Int. J. Syst. Bacteriol. (1997) 47:522-528.
VALIDATION LIST No. 109 (2006), other link:https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijs.0.64380-0
Validation List No. 109. "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2006) 56:925-927.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Thiomonas delicata meta-databases BacDive
Thiomonas delicata (Katayama-Fujimura et al. 1984) Kelly and Wood 2006 taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0487679 organism-specific Genomes On Line Database
2 records from this provider culture/stock collections Global Catalogue of Microorganisms
2831796995: Thiomonas delicata DSM 16361 organism-specific Integrated Microbial Genomes
Thiomonas delicata | SeqCode Registry taxonomy/phylogenetic SeqCode Registry
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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