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Taxonomy browser (Synechococcus sp. JA-3-3Ab)

Synechococcus sp. JA-3-3Ab

Taxonomy ID: 321327 (for references in articles please use NCBI:txid321327)
current name
Synechococcus sp. JA-3-3Ab
homotypic synonym:
Leptococcus yellowstonii JA-3-3-Ab, nom. inval. 1) in [Salazar VW et al. (2020)]
equivalent:
Cyanobacteria bacterium Yellowstone A-Prime
Synechococcus sp. OS-type A str. JA-3-3Ab
NCBI BLAST name: cyanobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Bacillati; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae; Synechococcus; unclassified Synechococcus
   Entrez records   
Database name Direct links
Nucleotide 10
Protein 4,336
Genome 1
Gene 2,898
Protein Clusters 488
Identical Protein Groups 3,468
BioProject 2
BioSample 1
Assembly 1
Taxonomy 1

Notes:

Comments and References:

Salazar VW et al. (2020), PubMed: abstract
Salazar, V.W., Tschoeke, D.A., Swings, J., Cosenza, C.A., Mattoso, M., Thompson, C.C., and Thompson, F.L. "A new genomic taxonomy system for the Synechococcus collective." Environ. Microbiol. (2020) 22(11):4557-4570.
genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Bhaya D et al. (2007)
Bhaya, D., Grossman, A.R., Steunou, A.S., Khuri, N., Cohan, F.M., Hamamura, N., Melendrez, M.C., Bateson, M.M., Ward, D.M., and Heidelberg, J.F. "Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses." ISME J. (2007) 1:703-713.

External Information Resources (NCBI LinkOut)

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2 records from this provider organism-specific BioCyc
GOLD: Go0000394 organism-specific Genomes On Line Database
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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