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Taxonomy browser (Pseudofrankia saprophytica)

Pseudofrankia saprophytica

Taxonomy ID: 298655 (for references in articles please use NCBI:txid298655)
current name
Pseudofrankia saprophytica (Nouioui et al. 2018) Gtari 2023 in [Validation List No. 210 (2023)]
basionym:
Frankia saprophytica Nouioui et al. 2018
type strain of Frankia saprophytica: DSM:105290, CECT:9314, personal::CN3
homotypic synonym:
"Pseudofrankia saprophytica" (Nouioui et al. 2018) Gtari et al. 2022, effective name 1) in [Gtari M (2022)]
includes:
Frankia sp. CN3
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Frankiales; Frankiaceae; Pseudofrankia
   Entrez records   
Database name Direct links Links from type
Nucleotide 140 140
Protein 3,787 -
Genome 1 -
Popset 8 -
PubMed Central 7 -
SRA Experiments 7 -
Protein Clusters 1,039 -
Identical Protein Groups 7,954 -
BioProject 2 -
BioSample 3 3
Assembly 3 1
Taxonomy 1 -

Notes:

Comments and References:
Validation List No. 210 (2023), PubMed: abstract
Validation List no. 210. "Valid publication of new names and new combinations effectively published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2023) 73(3):005812.
Gtari M (2022), doi: 10.3389/fmicb.2022.1041425, PubMed: abstract
Gtari, M. "Taxogenomic status of phylogenetically distant Frankia clusters warrants their elevation to the rank of genus: A description of Protofrankia gen. nov., Parafrankia gen. nov., and Pseudofrankia gen. nov. as three novel genera within the family Frankiaceae." Front. Microbiol. (2022) 13:1041425.
Nouioui I et al. (2018)
Nouioui, I., Ghodhbane-Gtari, F., Klenk, H.-P., and Gtari, M. "Frankia saprophytica sp. nov., an atypical, non-infective (Nod-) and non-nitrogen fixing (Fix-) actinobacterium isolated from Coriaria nepalensis root nodules." Int. J. Syst. Evol. Microbiol. (2018) 68:1090-1095.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Frankia saprophytica meta-databases BacDive
2 records from this provider organism-specific BioCyc
GOLD: Go0007910 organism-specific Genomes On Line Database
2508501039: Frankia saprophytica CN3 organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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