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Taxonomy browser (Vibrio splendidus)

Vibrio splendidus

Taxonomy ID: 29497 (for references in articles please use NCBI:txid29497)
current name
Vibrio splendidus (Beijerinck 1900) Baumann et al. 1981
type strain of Vibrio splendidus: ATCC:33125, CIP:102893, IFO:15643, NBRC:15643, BCCM/LMG:4042, BCCM/LMG:19031, NCCB:53037, NCIMB:1, DSM:19640
homotypic synonym:
"Photobacter splendidum" (sic) Beijerinck 1900, effective name 1)
Beneckea splendida (Beijerinck 1900) Reichelt et al. 1979 (Approved Lists 1980), nom. approb. 2)
includes:
Vibrio sp. AlyHP32
Vibrio sp. S/028/08 B
Vibrio sp. S/12/16 B
Vibrio sp. S/30/08 B
Vibrio sp. S/63/15 B
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Vibrio hemicentroti Kim et al. 2013
type strain of Vibrio hemicentroti: DSM:26178, KCTC:32085, personal::AlyHP32, CECT:8714
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 56,871 50,244 350
Protein 670,250 623,032 -
Structure 12 11 -
Genome 1 1 -
Popset 86 86 -
GEO Datasets 23 23 -
PubMed Central 688 688 -
Gene 19,302 19,302 -
SRA Experiments 160 158 -
Protein Clusters 6,551 6,551 -
Identical Protein Groups 271,021 263,832 -
BioProject 55 41 -
BioSample 377 354 6
Assembly 220 192 -
PubChem BioAssay 4 4 -
Taxonomy 18 1 -

Notes:

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Chibani CM et al. (2017)
Chibani, C.M., Poehlein, A., Roth, O., Liesegang, H., and Wendling, C.C. "Draft genome sequence of Vibrio splendidus DSM 19640." Genome Announc, (2017) 5:e01368-17.
Kim D et al. (2013)
Kim, D., Baik, K.S., Hwang, Y.S., Choi, J.-S., Kwon, J., and Seong, C.N. "Vibrio hemicentroti sp. nov., an alginate lyase-producing bacterium, isolated from the gut microflora of sea urchin (Hemicentrotus pulcherrimus)." Int. J. Syst. Evol. Microbiol. (2013) 63:3697-3703.
Lucena T et al. (2017)
Lucena, T., Macian, M.C., Arahal, D.R., Rodrigo-Torres, L., and Pujalte, M.J. "Whole genome sequences reveal Vibrio hemicentroti Kim et al. 2013 as a later heterotypic synonym of Vibrio splendidus (Beijerinck 1900) Baumann et al. 1981." Int. J. Syst. Evol. Microbiol. (2017) 67:1669-1671.
Reichelt JL et al. (1976)
Reichelt, J.L., Baumann, P., and Baumann, L. "Study of genetic relationships among marine species of the genera Beneckea and Photobacterium by means of in vitro DNA/DNA hybridization." Arch. Microbiol. (1976) 110:101-120.
Skerman VBD et al. (1980) (Beneckea splendida)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors): "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420.
VALIDATION LIST No. 6 (1981) (Vibrio splendidus)
VALIDATION LIST No. 6. Int. J. Syst. Bacteriol. (1981) 31:215-218.
Baumann P et al. (1980)
Baumann, P., Baumann, L., Bang, S.S., and Woolkalis, M.J. "Reevaluation of the taxonomy of Vibrio, Beneckea, and Photobacterium: abolition of the genus Beneckea." Curr. Microbiol. (1980) 4:127-132. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Vibrio splendidus meta-databases BacDive
12 records from this provider organism-specific BioCyc
5 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Vibrio splendidus culture/stock collections Global Catalogue of Microorganisms
57 records from this provider organism-specific Integrated Microbial Genomes
Vibrio splendidus taxonomy/phylogenetic Lifemap
2 records from this provider taxonomy/phylogenetic Ocean Biogeographic Information System
2 records from provider taxonomy/phylogenetic World Register of Marine Species
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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