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Taxonomy browser (Clostridium perfringens SM101)

Clostridium perfringens SM101

Taxonomy ID: 289380 (for references in articles please use NCBI:txid289380)
current name
Clostridium perfringens SM101
equivalent:
Clostridium perfringens str. SM101
Clostridium perfringens strain SM101
NCBI BLAST name: firmicutes
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium; Clostridium perfringens
   Entrez records   
Database name Direct links
Nucleotide 798
Protein 3,337
Structure 6
Genome 1
GEO Datasets 14
PubMed Central 2
Gene 2,723
SRA Experiments 29
Identical Protein Groups 2,761
BioProject 6
BioSample 27
Assembly 4
PubChem BioAssay 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Myers GS et al. (2006)
Myers, G.S., Rasko, D.A., Cheung, J.K., Ravel, J., Seshadri, R., DeBoy, R.T., Ren, Q., Varga, J., Awad, M.M., Brinkac, L.M., Daugherty, S.C., Haft, D.H., Dodson, R.J., Madupu, R., Nelson, W.C., Rosovitz, M.J., Sullivan, S.A., Khouri, H., Dimitrov, G.I., Watkins, K.L., Mulligan, S., Benton, J., Radune, D., Fisher, D.J., Atkins, H.S., Hiscox, T., Jost, B.H., Billington, S.J., Songer, J.G., McClane, B.A., Titball, R.W., Rood, J.I., Melville, S.B., and Paulsen, I.T. "Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Genome Res. (2006) 16:1031-1040.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider organism-specific BioCyc
GOLD Multi-Isolate Organism: Go0000323 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
642555126: Clostridium perfringens SM101 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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