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Taxonomy browser (Oenococcus oeni PSU-1)

Oenococcus oeni PSU-1

Taxonomy ID: 203123 (for references in articles please use NCBI:txid203123)
current name
Oenococcus oeni PSU-1
equivalent:
Oenococcus oeni str. PSU-1
Oenococcus oeni strain PSU-1
NCBI BLAST name: firmicutes
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Oenococcus; Oenococcus oeni
   Entrez records   
Database name Direct links
Nucleotide 193
Protein 2,423
Structure 7
Genome 1
Popset 1
GEO Datasets 8
Gene 2,134
SRA Experiments 1
Identical Protein Groups 1,998
BioProject 3
BioSample 2
Assembly 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Mills DA et al. (2005)
Mills, D.A., Rawsthorne, H., Parker, C., Tamir, D., and Makarova, K. "Genomic analysis of Oenococcus oeni PSU-1 and its relevance to winemaking." FEMS Microbiol. Rev. (2005) 29:465-475.
Makarova K et al. (2006)
Makarova, K., Slesarev, A., Wolf, Y., Sorokin, A., Mirkin, B., Koonin, E., Pavlov, A., Pavlova, N., Karamychev, V., Polouchine, N., Shakhova, V., Grigoriev, I., Lou, Y., Rohksar, D., Lucas, S., Huang, K., Goodstein, D.M., Hawkins, T., Plengvidhya, V., Welker, D., Hughes, J., Goh, Y., Benson, A., Baldwin, K., Lee, J.H., Diaz-Muniz, I., Dosti, B., Smeianov, V., Wechter, W., Barabote, R., Lorca, G., Altermann, E., Barrangou, R., Ganesan, B., Xie, Y., Rawsthorne, H., Tamir, D., Parker, C., Breidt, F., Broadbent, J., Hutkins, R., O'sullivan, D., Steele, J., Unlu, G., Saier, M., Klaenhammer, T., Richardson, P., Kozyavkin, S., Weimer, B., and Mills, D. "Comparative genomics of the lactic acid bacteria." Proc. Natl. Acad. Sci. USA (2006) 103:15611-15616.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Oenococcus oeni PSU-1 organism-specific BioCyc
GOLD: Go0000282 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
639633047: Oenococcus oeni PSU-1 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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