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Taxonomy browser (Streptomyces rochei)

Streptomyces rochei

Taxonomy ID: 1928 (for references in articles please use NCBI:txid1928)
current name
Streptomyces rochei Berger et al. 1953 (Approved Lists 1980) Berger et al. 1953 in [Skerman VBD et al. (1980)]
type strain of Streptomyces rochei Berger et al. 1953 (Approved Lists 1980): CGMCC:4.1425, ATCC:10739, ATCC:19245, ATCC:23956, CBS:224.46, CBS:939.68, CCUG:11115, CECT:3329, DSM:40231, HAMBI:2114, IFM:1188, IFO:12908, NBRC:12908, IMET:41386, JCM:4074, JCM:4668, BCCM/LMG:19313, NRRL:3533, NRRL:B-1559, NRRL:B-2410, NRRL-ISP:5231, RIA:1171, VKM:Ac:997, ISP:5231
homotypic synonym:
"Actinomyces rochei" (Berger et al. 1953) Preobrazhenskaya et al. in Gauze et al. 1957, effective name 1)
includes:
Streptomyces sp. NEAE-K
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces rochei group
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 4,954 4,953 1,635
Protein 49,789 49,764 -
Structure 4 2 -
Genome 1 1 -
Popset 73 73 -
GEO Datasets 2 2 -
PubMed Central 307 307 -
Gene 7,582 7,582 -
SRA Experiments 7 7 -
Protein Clusters 1 1 -
Identical Protein Groups 43,155 43,143 -
BioProject 17 17 -
BioSample 17 17 2
Assembly 11 11 -
Taxonomy 2 1 -

Notes:

Comments and References:
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. "Approved Lists of Bacterial Names." Intl. J. Syst. Bacteriol. (1980) 30(1):225-420.
Berger J et al. (1949)
Berger, J. et al. "Borrelidin, a new antibiotic with antiborrelia activity and pecicillin enhancement properties." Arch. Biochem. (1949) 22:476-478.
Gauze GF et al. (1957)
Gauze, G.F., Preobrazhenskaya, T.P., Kudrina, E.S., Blinov, N.O., Ryabova, I.D., and Sveshnikova, M.A. "Problems of classification of actinomycetes-antagonists." Government Publishing House of Medical Literature, Medgiz, Moscow 1957, pp. 1-398. [No PubMed record available.]
Komaki H (2021b), doi:10.1099/ijsem.0.004718
Komaki, H. "Reclassification of 15 Streptomyces species as synonyms of Streptomyces albogriseolus, Streptomyces althioticus, Streptomyces anthocyanicus, Streptomyces calvus, Streptomyces griseoincarnatus, Streptomyces mutabilis, Streptomyces pilosus or Streptomyces rochei." Int. J. Syst. Evol. Microbiol. (2021) 71(3):004718.
Shirling EB & Gottlieb D (1968b)
Shirling, E.B., and Gottlieb, D. "Cooperative description of type cultures of Streptomyces. III. Additional species descriptions from first and second studies." Int. J. Syst. Bacteriol. (1968) 18:279-392. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Streptomyces rochei meta-databases BacDive
2 records from this provider organism-specific BioCyc
Streptomyces rochei Berger et al. 1953 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
GOLD Multi-Isolate Organism: Go0455479 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Streptomyces rochei culture/stock collections Global Catalogue of Microorganisms
2 records from provider organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Organism modifiers

To hide organism modifiers click here
strain
1 [1 1] 10 [1] 12 [1] 13 [1]
14 [1] 173235 [1 1] 173260 [1 1] 173302 [1 1]
173315 [1 1] 173342 [1 1] 173609 [1 1] 173672 [1 1]
173702 [1 1] 173831 [1 1] 174515 [1 1] 19 [1 1]
190311L252 [1] 1AS_BP6 [1] 1MA6 [1] 2-39 [1]
27 [1] 29 [1] 2AS_BP1 [1] 3313 [1]
35-2 [1] 3AS_MO1 [1] 3IZ-6 [1] 3MKA [1]
4F [1] 4R [1] 50 [1 1] 533 [1]
5AS_MO3 [1] 6AS_MO4 [1] 6SM85 [1] 7434AN4 [1 1 15 7862 2]
8A [1 1] 8B [1 1] 8F [1] A-1 [1]
A104A [1] A104B [1] A134A [1] A147 [1 1]
A148_1492R [1] A159 [1] A16C [1] A2 [2 2 2]
A25 [1 1] A3 [1 1] A4 [2 2] A49 [1 1]
A4Str [1] A4_Stro [1] A70A [1] A76A [1]
A78 [1] A80 [1] AAU2 [1] AAUBD M 10 [1]
AB [1 1] AB1 [1] AB2 [1] ABI 07 [1]
AC-28 [1] AC-52 [1] AC04 [1] AC143 [1]
AC23 [1] ACT8FR [1] ADLK1 [1] AF03 [1]
AJAG7 [1] AK-29 [1 1] AL14 [1 1] AL15 [1 1]
AL18 [1 1] AM 32 [1 1] AM5-16 [1 1] AMET A311 [1]
AMET053 [1] ANH [1] ANMB 10 [1] AP20 [1 1]
AP9 [1 1] APS29 [1] AQS41 [1] AR1 [1]
ARC_12 [1] ARK1 [1] ARSS192-1 [1] ARSS192-5 [1]
AS-1-19 [1] ASB [1] ASH [1] ASP03 [1]
ASU 146 [1] ASWS02 [1] ATCC 23916 [1 1] AUMC B-504 [1]
AUMC B-528 [1] AUMC-B471 [1] Act8RP [1] Arg14 [1 1]
B-5 [1 1] B10 [1] B15 [1] BA-1 [1]
BAB1534 [1 1] BF3A1 [1] BI58 [1] BK7 [1 1]
BKM-4 [1] BLB8-1 [1] BLC16-3 [1] BLC17-1 [1]
BLC17-1(2) [1] BLC17-3 [1] BLC17-4 [1] BLH17-2 [1]
BLH17-4 [1] BLH5-14(2) [1] BN01 [1] BNPA2 [1]
BT02 [1] BT13 [1] BTSS 1001 [1] BUCBT-CR1 [1]
BpR-2 GER [1] BpR-3 GER [1] BpR-4 GER [1] C459 [1]
C517 [1] CA12 [1] CA4 [1] CA5 [1]
CB6J5 [1] CC36 [1 1 58] CC48 [1 1 386] CC71 [1 1 266]
CDB19 [1] CEMTC_8321 [1] CEMTC_8842 [1] CH1 [1]
CICR7 [1] CIFT MFB 14734 VRL24 [1] CMB47 [1] CMU3 [1]
CNS12 [1] CNS314 [1 1] CNS71 [1] CS-1 [1]
CS29 [1] CTF20 [1 1] CYS29 [1] D164 [1]
D21E05 [1 2 7439] D74 [1 1] DAB11 [1] DG4 [1]
DPS-122 [1] DRAH-24 [1] DSD120 [1] DSD1328 [1]
DSD1342 [1] DSD1381 [1] DSD1555 [1] DSD243 [1]
DSD2625 [1] DSD284 [1] DSD323 [1] DSD501 [1]
DSD839 [1] DSM 40231T [1] DW3 [1] DYAZ [1]
E1 [1] E6 [1 2] ENA4 [1] ERI-17 [1]
ES55 [1] El_Menia19 [1] F20 [2 4] F25 [1]
F26 [1] F27 [1] F28 [1] F3 ZS-31 [1]
F45 [1] FLe3 [1] FMA-91 [1 1] FRh1 [1]
FRo2 [1] FS1 8 [1] FsG [2 1 1] G-GN10 [1]
G127 [1] GA [1 1] GBWR76 [1] GC02 [1]
GR9 [1] GRE25 [1] GX131 [3 3 3] GX132 [3 3 3]
GZ131 [3 2 2] GZ132 [3 2 2] H055 [1] H3-1 [1 1]
HBUM173801 [1 1] HBUM174096 [1 1] HBUM174697 [1 1] HBUM175171 [1]
HF391 [1] HGs [2 1 1] HMM 13 [1] HPV01 [1]
HS2C1 [1] HV1_05cs05 [1] Helal_4 [1] I300C [1]
ICTA126 [1] IDWR19 [1 1] IKBG22 [1] INA 01452 [1]
INA 01509 [1] IS-02 [1] ITD-5 [1 1] ITD-6 [1 1]
IUPAC [1] JA246 [1] JCM 4276 [1] JCM 4601 [1]
JCM 4668 [1] JK1 [1 1 9 7002 2] JRS-27 [1] K12 [1 1]
K17 [1 1] KL93 [1] KMB-1 [1 1] KTS-35 [1]
L1 [1 1 1] L10904 [1] LG013 [1] LN204 [1 1]
LN221 [1 1] LN247 [1 1] Lac3 [1 1] MAE [1]
MCCB 223 [1 1] MDRC-23 [1] MDRC-95 [1] MFA-37 [1]
MJ06 [1] MK AntiMyce 1976 [1] ML15 [1] MML2009 [1 1]
MML2015 [1 1] MML2604 [1] MP21 [1] MP9-6 [1]
MPA-16 [1] MRK01PY [1] MSCA130 [1] MST8 [1]
MTS2 [1] MTS218 [1 1] MTTC 10109 [1] MdTCO12 [1]
MxAC6 [1] N4 [1 3] NBRC 12908 [1 3 24] NEAE-25 [1]
NEAE-K [1] NFAC2 [1] NGA34 [1 1] NLS-24 [1]
NM29 [1] NMR29 [1] NMR35 [1] NRRL 3533 [1 1 1]
NRRL B-1559 [4 2 1] NRRL B-2410 [1 1625 6 6] NRRL B-2410 PANKAJ [1] NS1 [1 1 443 1]
NaSa2 [1] O3-376 [1 1] OF1 [5 1] P42 [1 1]
P493 [1] PAH-13 [1] PBR-33 [1 1] PBR-34 [1 1]
PH1 [1] PHYTAH102 [1] PHYTAH105 [1] PHYTAH106 [1]
PHYTAH108 [1] PHYTAH109 [1] PHYTAH94 [1] PHYTAH98 [1]
PP7 [1] PP8 [1] PPD 6 [1] PSVZT4W1 [1]
PU-KB10-5 [1] PU-KB6-6 [1] PU-KB6-9 [1] PU_SAK11 [1]
PU_SAK13 [1] Pm03-1 [1] Q1 [1] Q1Stro-SQU [1]
R3 [2 1] R3-B [1] R92 [1] RAS1 [1]
RCB36 [1] RG3 [1] RGA1 [1] RS2 [1]
RSA1 [1] RT-18 [1 1] RT-36 [1 1] RT-6 [1 1]
Ra3 [1] Rad25 [1] Rad28 [1] S1-18 [1]
S1-18-1 [1] S145 [1] S2 [4 1] S2-29 [1]
S2-30 [1] S2-31 [1] S3-31 [1] S32 [1 1 6 6720]
S41 [2 1] SA-33 [1] SA1019 [1] SA32 [1]
SAM-26 [1] SAMC-RUSOL(10)4 [1] SAMS21 [1 1] SANLU-2 [1]
SAT1 [2] SAT18 [1] SAT4 [2] SBPL-21 [1]
SBVIT1 [1] SCOS [1] SCSIO ZJ89 [1] SCSIOZ-SH05 [1 1]
SCSIOZ-SH06 [1 1] SCSIOZ-SH07 [1 1] SCSIOZ-SH08 [1 1] SCSIOZ-SH09 [1 1]
SCSIOZ-SH12 [1 1] SCSIOZ-SH13 [1 1] SG-J10 [1] SH-3.2-R-7 [1]
SHFD5 [1] SHFD9 [1] SHFL5 [1] SHK3 [1]
SID8161 [1 1644] SJKS 1 [1] SK 78 [1] SM3 [1]
SS-1 [3 2] SS5 [1] SSCM102 [1] ST-158 [1]
ST70 [1] STR1 [1] SUN1 [1] SUN35 [1]
SUS1 [1] SV1 [1] SZ33 [1] Sa1 [1]
SaMo-23 [1] SaMo-35 [1] SaMo-5 [1] Sal35 [6 201]
ShR1 [1] St-15 [1] T170 [1 1] T178.2 [1 1]
T179 [1] T183 [1 1] T197 [1] T203 [1]
T60 [1] TA-1 [1 1] TA-2 [1] TDCS9 [1]
TDI-3 [1] THVSR [1] TN20 [1] TN48 [1]
TN56 [1] TcR2 [1] Tw L67G [1 1] UAE1-3 [1]
UAE2-1 [1] UU07 [1] VC34 [1] VITLG012 [1]
VITNSJ [1] VL-16 [1] VSMKU1023 [1] VV/R25 [1 1]
WA11-1-1 [1] WB-3 [1] WMF300-qm [1] WR-15 [1]
WR15 [1] WSA35 [1] WSB78 [1] WSS6 [1]
WYS24 [1] XD114 [1] XD128 [1] XD140 [1]
XD7 [1] XL-6 [1] Y197 [2] Z331-A [2]
ZLC-36 [1] ZY-2 [1] Za1 [1] bdu15 [1]
cfcc3115 [1 1] cfcc3131 [1 1] cfcc3165 [1 1] elh3 [1]
g91 [1 1] juwr812 [1 1] sdLi [1 1] vh21 [1 1]
vh52 [2 2] xsd08098 [1 1]
isolate
DGGE band 15-1 [1] DGGE band 15F-2 [1] F20 [1 11] OL19 [2 2 1]
OL27 [2 2 1] OL28 [2 2 1] R1-2A/D104 [1]
nat-host
Arachis hypogaea [1] honey bee [1] soil [1]
culture-collection
CGMCC:17115 [5 5] NBRC:12908 [1 2 24] NRRL:B-2410 [17 43155 4954 73 7]

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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