Taxonomy browser (Streptomyces albidoflavus)

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Taxonomy browser (Streptomyces albidoflavus)

Streptomyces albidoflavus

Taxonomy ID: 1886 (for references in articles please use NCBI:txid1886)

current name

Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 (Approved Lists 1980) emend. Rong et al. 2009, nom. approb.¹⁾

type strain of Streptomyces albidoflavus: ATCC :25422, CBS :416.34, CBS :920.69, BCRC :13699, CIP:105122, DSM :40455, ICMP :12537, IFO :13010, NBRC :13010, JCM :4446, KCTC :9202, BCCM/LMG :19300, NCIMB:10043, NRRL :B-1271, NRRL :B-2663, NRRL-ISP:5455, RIA:1202, VKM:Ac:746, ISP:5455
not considered type of Streptomyces albidoflavus: NCTC :12694, NBRC :13083, DSM :40233, NBRC :12790

homotypic synonym:

"Streptothrix albidoflava" Rossi Doria 1891, effective name²⁾

"Streptotrix albidoflava" (sic) Rossi Doria 1891, effective name³⁾

"Actinomyces albidoflavus" (Rossi Doria 1891) Gasperini 1894, effective name⁴⁾

Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 emend. Rong et al. 2009 emend. Nouioui et al. 2018, emended name⁵⁾ in [Nouioui I et al. (2018c)]

includes:

Streptomyces griseus 45H

NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

Streptomyces albidiflavus

heterotypic synonym

"Cladothrix albido-flava" (sic) (Rossi Doria 1891) Mace 1901, effective name⁶⁾

heterotypic synonym

Streptomyces globisporus subsp. caucasicus (Kudrina 1957) Pridham et al. 1958

type strain of Streptomyces globisporus subsp. caucasicus: ATCC :19907, CBS :120.60, DSM :40814, INA:13195/54, JCM :9867, NBRC :100770, NRRL :B-2593, NRRL-ISP:5157, RIA:319, VKM:Ac:1846, ISP:5157

homotypic synonym:

"Actinomyces globisporus var. caucasicus" Kudrina in Gauze et al. 1957, effective name⁷⁾

Lineage( full ): cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group

Entrez records
Database name	Direct links	Links from type
Nucleotide	22,163	758
Protein	520,458	-
Structure	5	-
Genome	1	-
Popset	55	-
GEO Datasets	79	-
PubMed Central	248	-
Gene	18,716	-
SRA Experiments	287	-
Protein Clusters	130	-
Identical Protein Groups	168,668	-
BioProject	48	-
BioSample	299	5
Assembly	70	2
Taxonomy	1	-

Notes:

1) 'Nom. approb.' (= nomen approbatum, = approved name) refers to a name which is included in the Approved Lists of Bacterial Names.
2) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
3) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
4) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
5) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.
6) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).
7) This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Prokaryotes (Bacteriological Code).

Comments and References:

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract

Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.

Streptomyces albidoflavus group

According to Rong et al. (2009), the members of this group as well as Streptomyces globisporus subsp. caucasicus and Streptomyces griseus subsp. solvifaciens (syn. Streptomyces alba) are synonymous and should be classified as Streptomyces albioflavus.

List of Changes in Taxonomic Opinion No. 11 (2010), other link:https://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijs.0.021212-0

Euzeby, J.P. "Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2010) 60:5-6.

Kiss Z et al. (2008)

Kiss, Z., Ward, A.C., Birko, Z., Chater, K.F., and Biro, S. "Streptomyces griseus 45H, a producer of the extracellular autoregulator protein factor C, is a member of the species Streptomyces albidoflavus." Int. J. Syst. Evol. Microbiol. (2008) 58:1029-1031.

Pridham RG et al. (1958), other link:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1057356/

Pridham, R.G., Hesseltine, C.W., and Benedict, R.G. "A guide for the classification of streptomycetes according to selected groups: placement of strains in morphological sections." Appl. Microbiol. (1958) 6(1):52-79. [No abstract available.]

Rossi-Doria T (1891)

Rossi-Doria, T. "Su di alcune specie di 'Streptothrix' trovate nell'aria studate in rapporto a quelle gia note a specialmente all 'Actinomyces'." Ann. Ist. Igiene Sper. Univ. Roma (1891) 1:399-438. [No PubMed record available.]

Shirling EB & Gottlieb D (1969)

Shirling, E.B., and Gottlieb, D. "Cooperative description of type cultures of Streptomyces. IV. Species descriptions from the second, third and fourth studies." Int. J. Syst. Bacteriol. (1969) 19:391-512. [No PubMed record available.]

Skerman VBD et al. (1980)

Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

Waksman SA & Henrici AT (1948b)

Waksman, S.A., and Henrici, A.T. "Family III. Streptomycetaceae Waksman and Henrici." IN: Breed, Murray, and Hitchens (Eds.), Bergey's Manual of Determinative Bacteriology, 6th Ed. (1948). The Williams and Wilkins Co., Balitmore. pp. 929-980. [No PubMed record available.]

Young JM et al. (1996) (reference with type strain information)

Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [No PubMed record available.]

Rong X et al. (2009)

Rong, X., Guo, Y., and Huang, Y. "Proposal to reclassify the Streptomyces albidoflavus clade on the basis of multilocus sequence analysis and DNA-DNA hybridization, and taxonomic elucidation of Streptomyces griseus subsp. solvifaciens." Syst. Appl. Microbiol. (2009) 32(5):314-322.

Kudrina ES (1957)

Kudrina, E.S., In: G.F. Gauze,, T.P. Preobrazhenskaya,, E.S. Kudrina,, N.O. Blinov,, I.D. Ryabova, and M.A. Sveshnikova, (eds): Problems of classification of actinomycetes-antagonists. Government Publishing House of Medical Literature, Medgiz, Moscow, USSR, 1957, pp. 1-398. [No PubMed record available.]

Hain T et al. (1997)

Hain, T., Ward-Rainey, N., Kroppenstedt, R.M., Stackebrandt, E., and Rainey, F.A. "Discrimination of Streptomyces albidoflavus strains based on the size and number of 16S-23S ribosomal DNA intergenic spacers." Int. J. Syst. Bacteriol. (1997) 47:202-206.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Streptomyces albidoflavus	meta-databases	BacDive
4 records from this provider	organism-specific	BioCyc
Streptomyces albidoflavus (Rossi Doria 1891) Waksman and Henrici 1948 (Approved Lists 1980)	taxonomy/phylogenetic	Encyclopedia of life
GOLD Multi-Isolate Organism: Go0353847	organism-specific	Genomes On Line Database
Streptomyces albidoflavus	culture/stock collections	Global Catalogue of Microorganisms
12 records from provider	organism-specific	Integrated Microbial Genomes

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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