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Taxonomy browser (Vibrio antiquarius)

Vibrio antiquarius

Taxonomy ID: 150340 (for references in articles please use NCBI:txid150340)
current name
"Vibrio antiquarius" Hasan et al. 2015, effective name 1)
type strain of "Vibrio antiquarius": personal::EX25
includes:
Vibrio sp. EX25
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio harveyi group; Vibrio diabolicus subgroup
   Entrez records   
Database name Direct links Links from type
Nucleotide 1,900 435
Protein 37,760 -
Genome 1 -
Popset 8 -
PubMed Central 13 -
Gene 12,768 -
SRA Experiments 17 -
Protein Clusters 1,806 -
Identical Protein Groups 42,626 -
BioProject 6 -
BioSample 22 2
Assembly 21 -
Taxonomy 1 -

Notes:

Comments and References:

Hasan NA et al. (2015)
Hasan, N.A., Grim, C.J., Lipp, E.K., Rivera, I.N.G., Chun, J., Haley, B.J., Taviani, E., Choi, S.Y., Hoq, M., Munk, A.C., Brettin, T.S., Bruce, D., Challacombe, J.F., Detter, J.C., Han, C.S., Eisen, J.A., Huq, A., and Colwell, R.R. "Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species." Proc. Natl. Acad. Sci. USA (2015) 112:E2813-E2819.
Urbanczyk H et al. (2013)
Urbanczyk, H., Ogura, Y., and Hayashi, T. "Taxonomic revision of Harveyi clade bacteria (family Vibrionaceae) based on analysis of whole genome sequences." Int. J. Syst. Evol. Microbiol. (2013) 63(7):2742-2751.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider organism-specific BioCyc
GOLD: 3 Organisms organism-specific Genomes On Line Database
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
3 records from this provider organism-specific Integrated Microbial Genomes
Vibrio antiquarius taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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