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Taxonomy browser (Rathayibacter toxicus)

Rathayibacter toxicus

Taxonomy ID: 145458 (for references in articles please use NCBI:txid145458)
current name
Rathayibacter toxicus (Riley and Ophel 1992) Sasaki et al. 1998
basionym:
Clavibacter toxicus Riley and Ophel 1992
type strain of Clavibacter toxicus: personal::CS14, ATCC:49908, CIP:104617, DSM:7488, ICMP:9525, JCM:9669, NCPPB:3552
homotypic synonym:
Rathayibacter toxicus (Riley and Ophel 1992) Sasaki et al. 1998 emend. Nouioui et al. 2018, emended name 1) in [Nouioui I et al. (2018c)]
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae; Rathayibacter
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 1,728 1,661 71
Protein 86,137 86,137 -
Genome 1 1 -
Popset 12 12 -
PubMed Central 42 42 -
Gene 6,700 6,700 -
SRA Experiments 24 22 -
Identical Protein Groups 7,179 7,179 -
BioProject 6 5 -
BioSample 42 40 2
Assembly 40 39 -
Taxonomy 2 1 -

Notes:

Comments and References:
Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
Young JM et al. (1996) (reference with type strain information)
Young, J.M., Saddler, G.S., Takikawa, Y., De Boer, S.H., Vauterin, L., Gardan, L., Gvozdyak, R.I., and Stead, D.E. "Names of plant pathogenic bacteria 1864-1995." Rev. Plant Pathol. (1996) 75:721-763. [No PubMed record available.]
Sasaki J et al. (1998)
Sasaki, J., Chijimatsu, M., and Suzuki, K. "Taxonomic significance of 2,4-diaminobutyric acid isomers in the cell wall peptidoglycan of actinomycetes and reclassification of Clavibacter toxicus as Rathayibacter toxicus comb. nov." Int. J. Syst. Bacteriol. (1998) 48:403-410.
Riley IT & Opehl KM (1992)
Riley, I.T., and Opehl, K.M. "Clavibacter toxicus sp. nov., the bacterium responsible for annual ryegrass toxicity in Australia." Int. J. Syst. Bacteriol. (1992) 42:64-68.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Rathayibacter toxicus meta-databases BacDive
4 records from this provider organism-specific BioCyc
Rathayibacter toxicus (Riley and Ophel 1992) Sasaki et al. 1998 taxonomy/phylogenetic Encyclopedia of life
2 records from this provider organism-specific Genomes On Line Database
Rathayibacter toxicus culture/stock collections Global Catalogue of Microorganisms
23 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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