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Taxonomy browser (Caldicellulosiruptor morganii)

Caldicellulosiruptor morganii

Taxonomy ID: 1387555 (for references in articles please use NCBI:txid1387555)
current name
"Caldicellulosiruptor morganii" Lee et al. 2018, effective name 1) in [Lee LL et al. (2018)]
type strain of "Caldicellulosiruptor morganii": personal::Rt8.B8, DSM:8990
includes:
Caldicellulosiruptor sp. Rt8.B8
NCBI BLAST name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacillota incertae sedis; Caldicellulosiruptorales; Caldicellulosiruptoraceae; Caldicellulosiruptor
   Entrez records   
Database name Direct links Links from type
Nucleotide 8 6
Protein 4,645 -
Genome 1 -
PubMed Central 6 -
SRA Experiments 6 -
Identical Protein Groups 2,412 -
BioProject 3 -
BioSample 2 2
Assembly 2 2
Taxonomy 1 -

Notes:

Comments and References:

Lee LL et al. (2018), doi: 10.1128/AEM.02694-17, PubMed: abstract
Lee, L.L., Blumer-Schuette, S.E., Izquierdo, J.A., Zurawski, J.V., Loder, A.J., Conway, J.M., Elkins, J.G., Podar, M., Clum, A., Jones, P.C., Piatek, M.J., Weighill, D.A., Jacobson, D.A., Adams, M.W.W., and Kelly, R.M. "Genus-wide assessment of lignocellulose utilization in the extremely thermophilic genus Caldicellulosiruptor by genomic, pangenomic, and metagenomic analyses." Appl. Environ. Microbiol. (2018) 84(9):e02694-17.
Bing RG et al. (2023b), doi:10.1128/mra.01292-22
Bing, R.G., Willard, D.J., Manesh, M.J.H., Laemthong, T., Crosby, .J.R, Adams, M.W.W., and Kelly, R.M. "Complete genome sequences of Caldicellulosiruptor acetigenus DSM 7040, Caldicellulosiruptor morganii DSM 8990 (RT8.B8), and Caldicellulosiruptor naganoensis DSM 8991 (NA10)." Microbiol. Resour. Announc. (2023) 12(3):e01292-22.
Lee LL et al. (2015)
Lee, L.L., Izquierdo, J.A., Blumer-Schuette, S.E., Zurawski, J.V., Conway, J.M., Cottingham, R.W., Huntemann, M., Copeland, A., Chen, I-M.A., Kyrpides, N., Markowitz, V., Palaniappan, K., Ivanova, N., Mikhailova, N., Ovchinnikova, G., Andersen, E., Pati, A., Stamatis, D., Reddy, T.B.K., Shapiro, N., Nordberg, H.P., Cantor, M.N., Hua, S.X., Woyke, T., and Kelly, R.M. "Complete genome sequences of Caldicellulosiruptor sp. strain Rt8.B8, Caldicellulosiruptor sp. strain Wai35.B1, and 'Thermoanaerobacter cellulolyticus'." Genome Announc. (2015) 3:e00440-15.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Caldicellulosiruptor morganii Rt8.B8 organism-specific BioCyc
GOLD: Go0035174 organism-specific Genomes On Line Database
2558860144: Caldicellulosiruptor morganii Rt8.B8, DSM 8990 organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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