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Taxonomy browser ([Collinsella] massiliensis)

[Collinsella] massiliensis 1)

Taxonomy ID: 1232426 (for references in articles please use NCBI:txid1232426)
current name
Collinsella massiliensis Padmanabhan et al. 2016
type strain of Collinsella massiliensis: personal::GD3, DSM:26110, CSUR:P902
includes:
Collinsella sp. GD3
NCBI BLAST name: actinobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Enorma
   Entrez records   
Database name Direct links Links from type
Nucleotide 763 138
Protein 3,833 -
Genome 1 -
PubMed Central 10 -
SRA Experiments 1 -
Protein Clusters 20 -
Identical Protein Groups 3,694 -
BioProject 5 -
BioSample 4 1
Assembly 4 -
Taxonomy 1 -

Notes:

Comments and References:

Enorma timonensis = Collinsella massiliensis
Both Enorma timonensis Ramasamy et al. 2016 [PMID 25197477] and Collinsella massiliensis Padmanabhan et al. 2016 [PMID 25197489] are described as Gram-positive, non-motile, non-sporulating rods isolated from the feces of a 53 year-old woman in an intensive care unit. Their genomes are >99.9% similar, identical within the limits of sequencing/assembly error. They should be considered heterotypic synonyms.
CSUR P902
Strain CSUR P902 is proposed as the type strain of both 'Corynebacterium ihumii' (Padmanabhan et al. 2014 [PMID 25197488] and 'Collinsella massiliensis' (Padmanabhan et al. 2014 [PMID 25197489].
Padmanabhan R et al. (2014b)
Padmanabhan, R., Dubourg, G., Lagier, J.-C., Nguyen, T.-T., Couderc, C., Rossi-Tamisier, M., Caputo, A., Raoult, D., and Fournier, P.-E. "Non-contiguous finished genome sequence and description of Collinsella massiliensis sp. nov." Stand. Genomic Sci. (2014) 9:1144-1158.
Ramasamy D et al. (2014)
Ramasamy, D., Dubourg, G., Robert, C., Caputo, A., Papazian, L., Raoult, D., and Fournier, P.-E. "Non contiguous-finished genome sequence and description of Enorma timonensis sp. nov." Stand. Genomic Sci. (2014) 9:970-986.
VALIDATION LIST No. 170 (2016)
Validation List No. 170: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2016) 66:2463-2466.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Collinsella massiliensis meta-databases BacDive
2 records from this provider organism-specific BioCyc
2 records from this provider organism-specific Genomes On Line Database
3 records from provider organism-specific Integrated Microbial Genomes
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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