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Taxonomy browser (Porphyromonas gulae)

Porphyromonas gulae

Taxonomy ID: 111105 (for references in articles please use NCBI:txid111105)
current name
Porphyromonas gulae Fournier et al. 2001 emend. Hahnke et al. 2016
type strain of Porphyromonas gulae: ATCC:51700, CCUG:47701, JCM:13865, NCTC:13180, personal::Loup 1, DSM:15663
NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 3,167 2,972 207
Protein 34,339 34,337 -
Genome 1 1 -
Popset 5 5 -
GEO Datasets 6 6 -
PubMed Central 99 99 -
Gene 4,301 2,239 -
SRA Experiments 32 31 -
Protein Clusters 948 948 -
Identical Protein Groups 16,791 16,784 -
BioProject 19 18 -
BioSample 49 46 4
Assembly 14 13 -
Taxonomy 2 1 -

Comments and References:

Fournier D et al. (2001)
Fournier, D., Mouton, C., Lapierre, P., Kato, T., Okuda K., and Menard, C. "Porphyromonas gulae sp. nov., an anaerobic, Gram-negative coccobacillus from the gingival sulcus of various animal hosts." Int. J. syst. Evol. Microbiol. (2001) 51:1179-1189.
Hahnke RL et al. (2016)
Hahnke, R.L., Meier-Kolthoff, J.P., García-López, M., Mukherjee, S., Huntemann, M., Ivanova, N.N., Woyke, T., Kyrpides, N.C., Klenk, H.-P., and Göker, M. "Genome-based taxonomic classification of Bacteroidetes." Front. Microbiol. (2016) 7:2003.
List of Changes in Taxonomic Opinion No. 26 (2017)
"Notification of changes in taxonomic opinion previously published outside the IJSEM." Int. J. Syst. Evol. Microbiol. (2017) 67(7):2081-2086.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Porphyromonas gulae meta-databases BacDive
Porphyromonas gulae Founier et al., 2001 taxonomy/phylogenetic Encyclopedia of life
15 records from this provider organism-specific Genomes On Line Database
Porphyromonas gulae culture/stock collections Global Catalogue of Microorganisms
11 records from provider organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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