Taxonomy browser (Rhodococcus pyridinivorans)

NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

Rhodococcus biphenylivorans Su et al. 2015 in [Validation List No. 163 (2015), Su X et al. (2015)]

type strain of Rhodococcus biphenylivorans: personal::TG9, CGMCC :1.12975, KCTC :29673, MCCC:1K00286

includes:

Rhodococcus sp. TG9

Lineage( full ): cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae; Rhodococcus

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	4,342	1,575	2,717
Protein	122,020	106,458	-
Genome	1	1	-
Popset	24	24	-
PubMed Central	149	149	-
Gene	20,413	9,565	-
SRA Experiments	36	35	-
Protein Clusters	1,429	1,429	-
Identical Protein Groups	68,581	64,048	-
BioProject	39	32	-
BioSample	54	48	6
Assembly	32	26	-
Taxonomy	6	1	-

Notes:

1) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.

Comments and References:

Yoon JH et al. (2000e), PubMed: abstract

Yoon, J.-H., Kang, S.-S., Cho, Y.-G., Lee, S.T., Kho, Y.H., Kim, C.J., and Park,Y.-H. "Rhodococcus pyridinivorans sp. nov., a pyridine-degrading bacterium." Int. J. Syst. Evol. Microbiol. (2000) 50(6):2173-2180.

Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract

Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.

Validation List No. 163 (2015)

Oren A, Garrity GM. 2015. List of new names and new combinations previously effectively, but not validly, published. International Journal of Systematic and Evolutionary Microbiology 65(Pt_4):1105-1111.

Su X et al. (2015), PubMed: abstract

Su, X., Liu, Y., Hashmi, M.Z., Hu, J., Ding, L., Wu, M., and Shen, C. "Rhodococcus biphenylivorans sp. nov., a polychlorinated biphenyl-degrading bacterium." Antonie van Leeuwenhoek (2015) 107(1):55-63.

Lee SD & Kim IS (2021), doi:10.1099/ijsem.0.004890

Lee, S.D., and Kim, I.S. "Rhodococcus spelaei sp. nov., isolated from a cave, and proposals that Rhodococcus biphenylivorans is a later synonym of Rhodococcus pyridinivorans, Rhodococcus qingshengii and Rhodococcus baikonurensis are later synonyms of Rhodococcus erythropolis, and Rhodococcus percolatus and Rhodococcus imtechensis are later synonyms of Rhodococcus opacus." Int. J. Syst. Evol. Microbiol. (2021) 71(7):004890.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Rhodococcus pyridinivorans	meta-databases	BacDive
2 records from this provider	organism-specific	BioCyc
Rhodococcus pyridinivorans Yoon et al. 2000	taxonomy/phylogenetic	Encyclopedia of life
6 records from this provider	organism-specific	Genomes On Line Database
Rhodococcus pyridinivorans	culture/stock collections	Global Catalogue of Microorganisms
7 records from provider	organism-specific	Integrated Microbial Genomes

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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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