Taxonomy browser (Sphingobacterium mizutaii)

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Taxonomy browser (Sphingobacterium mizutaii)

Sphingobacterium mizutaii

Taxonomy ID: 1010 (for references in articles please use NCBI:txid1010)

current name

Sphingobacterium mizutaii corrig. Yabuuchi et al. 1983

type strain of Sphingobacterium mizutaii corrig.: ATCC :33299, CCUG :15907, CIP:101122, GIFU:1203, IFO :14946, BCCM/LMG :8340, NBRC :14946, NCTC :12149, personal::KC1794, DSM :11724, JCM :21155

homotypic synonym:

Sphingobacterium mizutaii corrig. Yabuuchi et al. 1983 emend. Choi and Lee 2012, emended name¹⁾

Sphingobacterium mizutaii corrig. Yabuuchi et al. 1983 emend. Wauters et al. 2012, emended name²⁾

Sphingobacterium mizutaii corrig. Yabuuchi et al. 1983 emend. García-López et al. 2019, emended name³⁾

Sphingobacterium mizutae (sic) Yabuuchi et al. 1983, orth. var.⁴⁾

Flavobacterium mizutaii (Yabuuchi et al. 1983) Holmes et al. 1988

includes:

Sphingobacterium sp. CCUG 15262

Sphingobacterium sp. CDC D3663

Sphingobacterium sp. LMG 8346

Sphingobacterium sp. LMG 12852

NCBI BLAST name: CFB group bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:

heterotypic synonym

CDC group II-I

Lineage( full ): cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium

Entrez records
Database name	Subtree links	Direct links	Links from type
Nucleotide	2,045	1,841	273
Protein	25,924	22,084	-
Genome	1	1	-
Popset	15	15	-
PubMed Central	43	43	-
SRA Experiments	6	6	-
Identical Protein Groups	19,207	18,672	-
BioProject	12	10	-
BioSample	23	22	5
Assembly	16	15	-
Taxonomy	2	1	-

Notes:

1) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.
2) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.
3) emend. (emendavit): Used when the alteration of the diagnostic characters or of the circumscription of a taxon modifies the nature of the taxon.
4) 'Orth. var.' (= orthographic variant) refers to a name not following standard rules of orthography, such as gender disagreement between genus and species, either when originally published or mistakenly corrected in later publications; includes names which are "incorrect original spellings" and "incorrect subsequent spellings" in zoological parlance.

Comments and References:

Flavobacterium mizutaii vis-a-vis Sphingobacterium muzataii

Numerous studies support the placement of this species in the genus Sphingobacterium rather than Flavobacterium.

Choi HA & Lee SS (2012)

Choi, H.-A., and Lee, S.-S. "Sphingobacterium kyonggiense sp. nov., isolated from chloroethene-contaminated soil, and emended descriptions of Sphingobacterium daejeonense and Sphingobacterium mizutaii." Int. J. Syst. Evol. Microbiol. (2012) 62:2559-2564.

Holmes B et al. (1988)

Holmes, B., Weaver, R.E., Steigerwalt, A.G., and Brenner, D.J. "A taxonomic study of Flavobacterium spiritivorum and Sphingobacterium mizutae: proposal of Flavobacterium yabuuchiae sp. nov. and Flavobacterium mizutaii comb. nov." Int. J. Syst. Bacteriol. (1988) 38:348-353. [No PubMed record available.]

Wauters G et al. (2012)

Wauters, G., Janssens, M., De Baere, T., Vaneechoutte, M., and Deschaght, P. "Isolates belonging to CDC group II-i belong predominantly to Sphingobacterium mizutaii Yabuuchi et al. 1983: emended descriptions of S. mizutaii and of the genus Sphingobacterium." Int. J. Syst. Evol. Microbiol. (2012) 62:2598-2601.

Yabuuchi E et al. (1983)

Yabuuchi, E., Kaneko, T., Yano, I., Moss, C.W., and Miyoshi, N. "Sphingobacterium gen. nov., Sphingobacterium spiritivorum comb. nov., Sphingobacterium multivorum comb. nov., Sphingobacterium mizutae sp. nov., and Flavobacterium indologenes sp. nov.: glucose-nonfermenting gram-negative rods in CDC groups IIK-2 and IIb." Int. J. Syst. Bacteriol. (1983) 33:580-598. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Sphingobacterium mizutaii	meta-databases	BacDive
4 records from this provider	organism-specific	BioCyc
Flavobacterium mizutaii (Yabuuchi et al. 1983) Holmes et al. 1988	taxonomy/phylogenetic	Encyclopedia of life
GOLD Multi-Isolate Organism: Go0398298	organism-specific	Genomes On Line Database
Sphingobacterium mizutaii	culture/stock collections	Global Catalogue of Microorganisms
2773857900: Sphingobacterium mizutaii NCTC 12149	organism-specific	Integrated Microbial Genomes

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

Comments and questions to info@ncbi.nlm.nih.gov

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