PSII low MW protein (chloroplast) [Solms-laubachia linearis]
List of domain hits
Name | Accession | Description | Interval | E-value | ||
PLN00085 super family | cl29302 | photosystem II reaction center protein M (PsbM); Provisional |
2-34 | 1.09e-09 | ||
photosystem II reaction center protein M (PsbM); Provisional The actual alignment was detected with superfamily member PLN00085: Pssm-ID: 177708 Cd Length: 149 Bit Score: 48.96 E-value: 1.09e-09
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Name | Accession | Description | Interval | E-value | ||
PLN00085 | PLN00085 | photosystem II reaction center protein M (PsbM); Provisional |
2-34 | 1.09e-09 | ||
photosystem II reaction center protein M (PsbM); Provisional Pssm-ID: 177708 Cd Length: 149 Bit Score: 48.96 E-value: 1.09e-09
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PS_II_psbM | TIGR03038 | photosystem II reaction center protein PsbM; Members of this protein family are the ... |
1-33 | 6.20e-09 | ||
photosystem II reaction center protein PsbM; Members of this protein family are the photosystem II reaction center M protein, product of the psbM gene, in Cyanobacteria and their derived organelles in plants. This model resembles pfam05151 but has cutoffs set to avoid false-positive matches to similar (not necessarily homologous) sequences in species that are not photosynthetic. [Energy metabolism, Photosynthesis] Pssm-ID: 274403 Cd Length: 33 Bit Score: 44.56 E-value: 6.20e-09
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PsbM | pfam05151 | Photosystem II reaction centre M protein (PsbM); This family consists of several Photosystem ... |
1-31 | 7.48e-05 | ||
Photosystem II reaction centre M protein (PsbM); This family consists of several Photosystem II reaction centre M proteins (PsbM) from plants and cyanobacteria. During the photosynthetic light reactions in the thylakoid membranes of cyanobacteria, algae, and plants, photosystem II (PSII), a multi-subunit membrane protein complex, catalyzes oxidation of water to molecular oxygen and reduction of plastoquinon. Pssm-ID: 398700 Cd Length: 31 Bit Score: 34.28 E-value: 7.48e-05
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Name | Accession | Description | Interval | E-value | ||
PLN00085 | PLN00085 | photosystem II reaction center protein M (PsbM); Provisional |
2-34 | 1.09e-09 | ||
photosystem II reaction center protein M (PsbM); Provisional Pssm-ID: 177708 Cd Length: 149 Bit Score: 48.96 E-value: 1.09e-09
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PS_II_psbM | TIGR03038 | photosystem II reaction center protein PsbM; Members of this protein family are the ... |
1-33 | 6.20e-09 | ||
photosystem II reaction center protein PsbM; Members of this protein family are the photosystem II reaction center M protein, product of the psbM gene, in Cyanobacteria and their derived organelles in plants. This model resembles pfam05151 but has cutoffs set to avoid false-positive matches to similar (not necessarily homologous) sequences in species that are not photosynthetic. [Energy metabolism, Photosynthesis] Pssm-ID: 274403 Cd Length: 33 Bit Score: 44.56 E-value: 6.20e-09
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psbM | CHL00080 | photosystem II protein M |
1-34 | 8.97e-08 | ||
photosystem II protein M Pssm-ID: 177019 Cd Length: 34 Bit Score: 41.69 E-value: 8.97e-08
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psbM | PRK04989 | photosystem II reaction center protein M; Provisional |
1-32 | 8.85e-06 | ||
photosystem II reaction center protein M; Provisional Pssm-ID: 235328 Cd Length: 35 Bit Score: 36.59 E-value: 8.85e-06
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PsbM | pfam05151 | Photosystem II reaction centre M protein (PsbM); This family consists of several Photosystem ... |
1-31 | 7.48e-05 | ||
Photosystem II reaction centre M protein (PsbM); This family consists of several Photosystem II reaction centre M proteins (PsbM) from plants and cyanobacteria. During the photosynthetic light reactions in the thylakoid membranes of cyanobacteria, algae, and plants, photosystem II (PSII), a multi-subunit membrane protein complex, catalyzes oxidation of water to molecular oxygen and reduction of plastoquinon. Pssm-ID: 398700 Cd Length: 31 Bit Score: 34.28 E-value: 7.48e-05
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psbM | PRK14094 | photosystem II reaction center protein PsbM; |
1-29 | 8.17e-03 | ||
photosystem II reaction center protein PsbM; Pssm-ID: 172584 Cd Length: 50 Bit Score: 29.56 E-value: 8.17e-03
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Blast search parameters | ||||
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