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Conserved domains on  [gi|488323291|ref|WP_002392676|]
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MULTISPECIES: PepSY domain-containing protein [Enterococcus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YkoI COG3212
PepSY domain containing protein, regulator of zincin peptidase activity [Posttranslational ...
 155-217 8.32e-13

PepSY domain containing protein, regulator of zincin peptidase activity [Posttranslational modification, protein turnover, chaperones];


:

Pssm-ID: 442445  Cd Length: 66  Bit Score: 60.99  E-value: 8.32e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488323291 155 IISREQATTLAEKEAKvGQATDWKLEKELGITYWEVKVKEGQ-QKIEVKIDAHSGKILTTERDD 217
Cdd:COG3212    4 IISLEQALEIALARVP-GRVLEVELERDDGRLVYEVEILTPDgRVYEVEVDAKTGEVLKVEEDD 66
PepSY pfam03413
Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory ...
 72-131 1.64e-07

Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase _ Bacillus subtilis YPEB.


:

Pssm-ID: 427284 [Multi-domain]  Cd Length: 59  Bit Score: 46.51  E-value: 1.64e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488323291   72 AVSLEKVTTAFEKKYPEAKITSLQLDTDfGRYFYEIEGVDQQKEYQVEVNAETGEFTKEK 131
Cdd:pfam03413   1 KISLEQALAIALKAVPGAVIEAELEPED-GKLVYEVEVDPDGREYEVYIDAYTGEVLKVE 59
 
Name Accession Description Interval E-value
YkoI COG3212
PepSY domain containing protein, regulator of zincin peptidase activity [Posttranslational ...
 155-217 8.32e-13

PepSY domain containing protein, regulator of zincin peptidase activity [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 442445  Cd Length: 66  Bit Score: 60.99  E-value: 8.32e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488323291 155 IISREQATTLAEKEAKvGQATDWKLEKELGITYWEVKVKEGQ-QKIEVKIDAHSGKILTTERDD 217
Cdd:COG3212    4 IISLEQALEIALARVP-GRVLEVELERDDGRLVYEVEILTPDgRVYEVEVDAKTGEVLKVEEDD 66
PepSY pfam03413
Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory ...
 155-214 1.24e-09

Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase _ Bacillus subtilis YPEB.


Pssm-ID: 427284 [Multi-domain]  Cd Length: 59  Bit Score: 52.29  E-value: 1.24e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488323291  155 IISREQATTLAEKEAKvGQATDWKLEKELGITYWEVKVKEGQQKIEVKIDAHSGKILTTE 214
Cdd:pfam03413   1 KISLEQALAIALKAVP-GAVIEAELEPEDGKLVYEVEVDPDGREYEVYIDAYTGEVLKVE 59
PepSY pfam03413
Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory ...
 72-131 1.64e-07

Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase _ Bacillus subtilis YPEB.


Pssm-ID: 427284 [Multi-domain]  Cd Length: 59  Bit Score: 46.51  E-value: 1.64e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488323291   72 AVSLEKVTTAFEKKYPEAKITSLQLDTDfGRYFYEIEGVDQQKEYQVEVNAETGEFTKEK 131
Cdd:pfam03413   1 KISLEQALAIALKAVPGAVIEAELEPED-GKLVYEVEVDPDGREYEVYIDAYTGEVLKVE 59
YkoI COG3212
PepSY domain containing protein, regulator of zincin peptidase activity [Posttranslational ...
 72-133 1.82e-07

PepSY domain containing protein, regulator of zincin peptidase activity [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 442445  Cd Length: 66  Bit Score: 46.74  E-value: 1.82e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488323291  72 AVSLEKVTTAFEKKYPeAKITSLQLDTDFGRYFYEIEGVD-QQKEYQVEVNAETGEFTKEKVE 133
Cdd:COG3212    4 IISLEQALEIALARVP-GRVLEVELERDDGRLVYEVEILTpDGRVYEVEVDAKTGEVLKVEED 65
 
Name Accession Description Interval E-value
YkoI COG3212
PepSY domain containing protein, regulator of zincin peptidase activity [Posttranslational ...
 155-217 8.32e-13

PepSY domain containing protein, regulator of zincin peptidase activity [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 442445  Cd Length: 66  Bit Score: 60.99  E-value: 8.32e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 488323291 155 IISREQATTLAEKEAKvGQATDWKLEKELGITYWEVKVKEGQ-QKIEVKIDAHSGKILTTERDD 217
Cdd:COG3212    4 IISLEQALEIALARVP-GRVLEVELERDDGRLVYEVEILTPDgRVYEVEVDAKTGEVLKVEEDD 66
PepSY pfam03413
Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory ...
 155-214 1.24e-09

Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase _ Bacillus subtilis YPEB.


Pssm-ID: 427284 [Multi-domain]  Cd Length: 59  Bit Score: 52.29  E-value: 1.24e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488323291  155 IISREQATTLAEKEAKvGQATDWKLEKELGITYWEVKVKEGQQKIEVKIDAHSGKILTTE 214
Cdd:pfam03413   1 KISLEQALAIALKAVP-GAVIEAELEPEDGKLVYEVEVDPDGREYEVYIDAYTGEVLKVE 59
PepSY pfam03413
Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory ...
 72-131 1.64e-07

Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase _ Bacillus subtilis YPEB.


Pssm-ID: 427284 [Multi-domain]  Cd Length: 59  Bit Score: 46.51  E-value: 1.64e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 488323291   72 AVSLEKVTTAFEKKYPEAKITSLQLDTDfGRYFYEIEGVDQQKEYQVEVNAETGEFTKEK 131
Cdd:pfam03413   1 KISLEQALAIALKAVPGAVIEAELEPED-GKLVYEVEVDPDGREYEVYIDAYTGEVLKVE 59
YkoI COG3212
PepSY domain containing protein, regulator of zincin peptidase activity [Posttranslational ...
 72-133 1.82e-07

PepSY domain containing protein, regulator of zincin peptidase activity [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 442445  Cd Length: 66  Bit Score: 46.74  E-value: 1.82e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 488323291  72 AVSLEKVTTAFEKKYPeAKITSLQLDTDFGRYFYEIEGVD-QQKEYQVEVNAETGEFTKEKVE 133
Cdd:COG3212    4 IISLEQALEIALARVP-GRVLEVELERDDGRLVYEVEILTpDGRVYEVEVDAKTGEVLKVEED 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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