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Conserved domains on  [gi|1859676571|sp|A0A0M4FTF3|]
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RecName: Full=Blue copper protein; Short=PhBcp; Flags: Precursor

Protein Classification

Cupredoxin and Phytocyanin domain-containing protein( domain architecture ID 10362916)

Cupredoxin and Phytocyanin domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Phytocyanin cd04216
Phytocyanins are plant blue or type I copper proteins; Phytocyanins are plant blue or type I ...
 116-214 7.71e-42

Phytocyanins are plant blue or type I copper proteins; Phytocyanins are plant blue or type I copper proteins. They are involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. Phytocyanins are classified into four groups: stellacyanin, plantacyanin, uclacyanin and early nodulin groups. Stellacyanin appears to be associated with the plant cell wall; it may be involved in oxidative reactions to build polymeric material making up the cell wall. Plantacyanin is shown to play a role in reproduction in Arabidopsis. Plantacyanins may also be stress-related proteins and may be involved in plant defense responses. The early nodulin-like protein (OsENODL1) from Oryza sativa is expressed specifically at the late developmental stage of the seeds.


:

Pssm-ID: 259878 [Multi-domain]  Cd Length: 98  Bit Score: 138.55  E-value: 7.71e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571 116 TEYWVGDDKGWTIDVDYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPSEGLTSGHDVITLAAPGKKWY 195
Cdd:cd04216     1 TDYTVGDSNGWDLPVNYTAWASGKTFRVGDSLVFNYNAGAHSVVEVNEADYDSCDTSNPINTYTSGNDSVTLTKPGTRYF 80

                          90
                  ....*....|....*....
gi 1859676571 196 ICGFPTHCsEHKQKLAITV 214
Cdd:cd04216    81 ICGVPGHC-QSGMKLAINV 98
Cupredoxin super family cl19115
Cupredoxin superfamily; Cupredoxins contain type I copper centers and are involved in ...
 25-100 1.77e-15

Cupredoxin superfamily; Cupredoxins contain type I copper centers and are involved in inter-molecular electron transfer reactions. Cupredoxins are blue copper proteins, having an intense blue color due to the presence of a mononuclear type 1 (T1) copper site. Structurally, the cupredoxin-like fold consists of a beta-sandwich with 7 strands in 2 beta-sheets, which is arranged in a Greek-key beta-barrel. Some of these proteins have lost the ability to bind copper. The majority of family members contain multiple cupredoxin domain repeats: ceruloplasmin and the coagulation factors V/VIII have six repeats; laccase, ascorbate oxidase, spore coat protein A, and multicopper oxidase CueO contain three repeats; and nitrite reductase has two repeats. Others are mono-domain cupredoxins, such as plastocyanin, pseudoazurin, plantacyanin, azurin, rusticyanin, stellacyanin, quinol oxidase, and the periplasmic domain of cytochrome c oxidase subunit II.


The actual alignment was detected with superfamily member cd11014:

Pssm-ID: 473140  Cd Length: 101  Bit Score: 70.11  E-value: 1.77e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571  25 TQYLVGDDRGWTLDF--DYQTWAKNKTFKVGDTL-----------------------APPPSEGLTSGYDVITLTKPGKK 79
Cdd:cd11014     1 TVYKVGDSDGWTVYDsdYYYKWSSSKTFHVGDSLifqynkefhdvtevtgeefescnSTSPIAVYNTGHDIIKLTKPGQY 80

                          90       100
                  ....*....|....*....|.
gi 1859676571  80 WYICGVPTHCsDYNQKLVITV 100
Cdd:cd11014    81 YFICGVPGHC-DSGQKLQVNV 100
 
Name Accession Description Interval E-value
Phytocyanin cd04216
Phytocyanins are plant blue or type I copper proteins; Phytocyanins are plant blue or type I ...
 116-214 7.71e-42

Phytocyanins are plant blue or type I copper proteins; Phytocyanins are plant blue or type I copper proteins. They are involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. Phytocyanins are classified into four groups: stellacyanin, plantacyanin, uclacyanin and early nodulin groups. Stellacyanin appears to be associated with the plant cell wall; it may be involved in oxidative reactions to build polymeric material making up the cell wall. Plantacyanin is shown to play a role in reproduction in Arabidopsis. Plantacyanins may also be stress-related proteins and may be involved in plant defense responses. The early nodulin-like protein (OsENODL1) from Oryza sativa is expressed specifically at the late developmental stage of the seeds.


Pssm-ID: 259878 [Multi-domain]  Cd Length: 98  Bit Score: 138.55  E-value: 7.71e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571 116 TEYWVGDDKGWTIDVDYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPSEGLTSGHDVITLAAPGKKWY 195
Cdd:cd04216     1 TDYTVGDSNGWDLPVNYTAWASGKTFRVGDSLVFNYNAGAHSVVEVNEADYDSCDTSNPINTYTSGNDSVTLTKPGTRYF 80

                          90
                  ....*....|....*....
gi 1859676571 196 ICGFPTHCsEHKQKLAITV 214
Cdd:cd04216    81 ICGVPGHC-QSGMKLAINV 98
Cu_bind_like pfam02298
Plastocyanin-like domain; This family represents a domain found in flowering plants related to ...
 126-203 1.30e-27

Plastocyanin-like domain; This family represents a domain found in flowering plants related to the copper binding protein plastocyanin. Some members of this family may not bind copper due to the lack of key residues.


Pssm-ID: 280462  Cd Length: 84  Bit Score: 101.66  E-value: 1.30e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571 126 WT--IDVDYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPSEGLTSGHDVITLAAPGKKWYICGFPTHC 203
Cdd:pfam02298   1 WTvnAESDYTTWAQGKTFRVGDTLVFKYDSDFHNVVEVTKADYESCDTSKPIRNYTTGSDKVTLTKPGPNYFICGVPGHC 80
PLN03148 PLN03148
Blue copper-like protein; Provisional
 116-198 6.63e-20

Blue copper-like protein; Provisional


Pssm-ID: 178693  Cd Length: 167  Bit Score: 83.77  E-value: 6.63e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571 116 TEYWVGDDKGWTIDVDYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPSEGLTSGHDVITLAAPGKKWY 195
Cdd:PLN03148   21 TDHIVGANKGWNPGINYTLWANNQTFYVGDLISFRYQKTQYNVFEVNQTGYDNCTTEGAAGNWTSGKDFIPLNKAKRYYF 100


                  ...
gi 1859676571 196 ICG 198
Cdd:PLN03148  101 ICG 103
Mavicyanin cd11014
Mavicyanin is a subclass of phytocyanins, a plant blue copper protein; Mavicyanin is a ...
 25-100 1.77e-15

Mavicyanin is a subclass of phytocyanins, a plant blue copper protein; Mavicyanin is a glycosylated protein isolated from Cucurbita pepo medullosa (zucchini) peelings. It belongs to the phytocyanin family of blue copper proteins, a ubiquitous family of plant cupredoxins. Mavicyanin is involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. The copper is tetrahedrally coordinated by a cysteine, 2 histidines, and a glutamine residue, like in the case of stellacyanin. The biological roles of mavicyanin have not been elucidated yet.


Pssm-ID: 259900  Cd Length: 101  Bit Score: 70.11  E-value: 1.77e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571  25 TQYLVGDDRGWTLDF--DYQTWAKNKTFKVGDTL-----------------------APPPSEGLTSGYDVITLTKPGKK 79
Cdd:cd11014     1 TVYKVGDSDGWTVYDsdYYYKWSSSKTFHVGDSLifqynkefhdvtevtgeefescnSTSPIAVYNTGHDIIKLTKPGQY 80

                          90       100
                  ....*....|....*....|.
gi 1859676571  80 WYICGVPTHCsDYNQKLVITV 100
Cdd:cd11014    81 YFICGVPGHC-DSGQKLQVNV 100
Cu_bind_like pfam02298
Plastocyanin-like domain; This family represents a domain found in flowering plants related to ...
 35-89 1.15e-12

Plastocyanin-like domain; This family represents a domain found in flowering plants related to the copper binding protein plastocyanin. Some members of this family may not bind copper due to the lack of key residues.


Pssm-ID: 280462  Cd Length: 84  Bit Score: 61.98  E-value: 1.15e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571  35 WT--LDFDYQTWAKNKTFKVGDTL-----------------------APPPSEGLTSGYDVITLTKPGKKWYICGVPTHC 89
Cdd:pfam02298   1 WTvnAESDYTTWAQGKTFRVGDTLvfkydsdfhnvvevtkadyescdTSKPIRNYTTGSDKVTLTKPGPNYFICGVPGHC 80
 
Name Accession Description Interval E-value
Phytocyanin cd04216
Phytocyanins are plant blue or type I copper proteins; Phytocyanins are plant blue or type I ...
 116-214 7.71e-42

Phytocyanins are plant blue or type I copper proteins; Phytocyanins are plant blue or type I copper proteins. They are involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. Phytocyanins are classified into four groups: stellacyanin, plantacyanin, uclacyanin and early nodulin groups. Stellacyanin appears to be associated with the plant cell wall; it may be involved in oxidative reactions to build polymeric material making up the cell wall. Plantacyanin is shown to play a role in reproduction in Arabidopsis. Plantacyanins may also be stress-related proteins and may be involved in plant defense responses. The early nodulin-like protein (OsENODL1) from Oryza sativa is expressed specifically at the late developmental stage of the seeds.


Pssm-ID: 259878 [Multi-domain]  Cd Length: 98  Bit Score: 138.55  E-value: 7.71e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571 116 TEYWVGDDKGWTIDVDYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPSEGLTSGHDVITLAAPGKKWY 195
Cdd:cd04216     1 TDYTVGDSNGWDLPVNYTAWASGKTFRVGDSLVFNYNAGAHSVVEVNEADYDSCDTSNPINTYTSGNDSVTLTKPGTRYF 80

                          90
                  ....*....|....*....
gi 1859676571 196 ICGFPTHCsEHKQKLAITV 214
Cdd:cd04216    81 ICGVPGHC-QSGMKLAINV 98
Plantacyanin cd11013
Plantacyanin is a subclass of phytocyanins, plant type I copper proteins; Plantacyanins belong ...
 116-214 8.23e-29

Plantacyanin is a subclass of phytocyanins, plant type I copper proteins; Plantacyanins belong to the phytocyanin family of blue copper proteins, a ubiquitous family of plant cupredoxins. Plantacyanin is involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. The exact function of plantacyanin is unknown. However plantacyanin is shown to play a role in reproduction in Arabidopsis. Plantacyanins may also be stress-related proteins and be involved in plant defense responses.


Pssm-ID: 259899  Cd Length: 95  Bit Score: 105.13  E-value: 8.23e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571 116 TEYWVGDDKGWTIDVDyqAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPSEGLTSGHDVITLaAPGKKWY 195
Cdd:cd11013     1 ATYVVGDSIGWTFGVV--GWPNGKTFRAGDVLVFNYDPSAHNVVVVDEGGYRTCKAPPGAIVYTSGDDKITL-PKGVNYF 77

                          90
                  ....*....|....*....
gi 1859676571 196 ICGFPTHCsEHKQKLAITV 214
Cdd:cd11013    78 ICSFPGHC-TSGMKIAVTA 95
Stellacyanin cd13920
Stellacyanin is a subclass of phytocyanins, a plant type I copper protein; Stellacyanin is a ...
 116-214 7.41e-28

Stellacyanin is a subclass of phytocyanins, a plant type I copper protein; Stellacyanin is a subclass of the phytocyanins, a ubiquitous family of plant cupredoxins. Stellacyanin is involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. The copper is tetrahedrally coordinated by a cysteine, 2 histidines, and a glutamine residue. The glutamine residue substitutes for a methione ligand typically found in other blue copper proteins. The exact function of stellacyanin is unknown. However, stellacyanin appears to be associated with the plant cell wall; it may be involved in oxidative reactions to build polymeric material making up the cell wall.


Pssm-ID: 259987 [Multi-domain]  Cd Length: 101  Bit Score: 102.78  E-value: 7.41e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571 116 TEYWVGDDKGWTIDVD---YQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPSEGLTSGHDVITLAAPGK 192
Cdd:cd13920     1 TDHIVGGSLGWSIPPNasfYTDWAANRTFRVGDSLVFNFEAGVHNVVEVSKEEYDNCTTTNPIKVFTTGPVIITLNETGT 80

                          90       100
                  ....*....|....*....|..
gi 1859676571 193 KWYICGFPTHCSEhKQKLAITV 214
Cdd:cd13920    81 RYFICTVGNHCSL-GQKVSINV 101
Cu_bind_like pfam02298
Plastocyanin-like domain; This family represents a domain found in flowering plants related to ...
 126-203 1.30e-27

Plastocyanin-like domain; This family represents a domain found in flowering plants related to the copper binding protein plastocyanin. Some members of this family may not bind copper due to the lack of key residues.


Pssm-ID: 280462  Cd Length: 84  Bit Score: 101.66  E-value: 1.30e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571 126 WT--IDVDYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPSEGLTSGHDVITLAAPGKKWYICGFPTHC 203
Cdd:pfam02298   1 WTvnAESDYTTWAQGKTFRVGDTLVFKYDSDFHNVVEVTKADYESCDTSKPIRNYTTGSDKVTLTKPGPNYFICGVPGHC 80
Mavicyanin cd11014
Mavicyanin is a subclass of phytocyanins, a plant blue copper protein; Mavicyanin is a ...
 116-214 1.61e-27

Mavicyanin is a subclass of phytocyanins, a plant blue copper protein; Mavicyanin is a glycosylated protein isolated from Cucurbita pepo medullosa (zucchini) peelings. It belongs to the phytocyanin family of blue copper proteins, a ubiquitous family of plant cupredoxins. Mavicyanin is involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. The copper is tetrahedrally coordinated by a cysteine, 2 histidines, and a glutamine residue, like in the case of stellacyanin. The biological roles of mavicyanin have not been elucidated yet.


Pssm-ID: 259900  Cd Length: 101  Bit Score: 102.09  E-value: 1.61e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571 116 TEYWVGDDKGWTIDV--DYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPSEGLTSGHDVITLAAPGKK 193
Cdd:cd11014     1 TVYKVGDSDGWTVYDsdYYYKWSSSKTFHVGDSLIFQYNKEFHDVTEVTGEEFESCNSTSPIAVYNTGHDIIKLTKPGQY 80

                          90       100
                  ....*....|....*....|.
gi 1859676571 194 WYICGFPTHCsEHKQKLAITV 214
Cdd:cd11014    81 YFICGVPGHC-DSGQKLQVNV 100
Phytocyanin_like_1 cd11017
A subclass of phytocyanins, plant blue or type I copper proteins; Phytocyanins are plant blue ...
 116-214 8.99e-21

A subclass of phytocyanins, plant blue or type I copper proteins; Phytocyanins are plant blue or type I copper proteins. They are involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. Phytocyanins are classified into four groups: stellacyanin, plantacyanin, uclacyanin and early nodulin groups. Members of this unknown subgroup appear to have lost the T1 copper binding site.


Pssm-ID: 259903  Cd Length: 99  Bit Score: 84.36  E-value: 8.99e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571 116 TEYWVGDD-KGWTIDVDYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPSEGLTSGH-DVITLAAPGKK 193
Cdd:cd11017     1 TLHTVGGNrIGWNPNINYTDWAKMHGFYSGDWLVFRYQRGRHNVVQVNETGYDNCDASNPISNYSSGGrDIFQLNETKRY 80

                          90       100
                  ....*....|....*....|.
gi 1859676571 194 WYICGFpTHCSEhKQKLAITV 214
Cdd:cd11017    81 YFICGR-GYCYG-GMKLAITV 99
PLN03148 PLN03148
Blue copper-like protein; Provisional
 116-198 6.63e-20

Blue copper-like protein; Provisional


Pssm-ID: 178693  Cd Length: 167  Bit Score: 83.77  E-value: 6.63e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571 116 TEYWVGDDKGWTIDVDYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPSEGLTSGHDVITLAAPGKKWY 195
Cdd:PLN03148   21 TDHIVGANKGWNPGINYTLWANNQTFYVGDLISFRYQKTQYNVFEVNQTGYDNCTTEGAAGNWTSGKDFIPLNKAKRYYF 100


                  ...
gi 1859676571 196 ICG 198
Cdd:PLN03148  101 ICG 103
OsENODL1_like cd11019
Early nodulin-like protein (OsENODL1) and similar proteins; This family includes early ...
 116-214 1.35e-19

Early nodulin-like protein (OsENODL1) and similar proteins; This family includes early nodulin-like protein (OsENODL1) from Oryza sativa and similar proteins. It belongs to the phytocyanin family of blue copper proteins, a ubiquitous family of plant cupredoxins. Phytocyanin is involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. OsENODL1 expression occurs specifically at the late developmental stage of the seeds. Members of this subgroup appear to have lost the T1 copper binding site.


Pssm-ID: 259905  Cd Length: 103  Bit Score: 81.16  E-value: 1.35e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571 116 TEYWVGDDKGWTIDVD----YQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPSEGLTSGHDVITLAAPG 191
Cdd:cd11019     1 REFKVGGKDGWKVPPSasesYNQWAERNRFQVGDSLVFKYDKGNDSVLEVTKEDYDSCNTSSPIARFNDGNTKFTLDRSG 80

                          90       100
                  ....*....|....*....|...
gi 1859676571 192 KKWYICGFPTHCsEHKQKLAITV 214
Cdd:cd11019    81 PFYFISGAPGHC-EKGQKLIVVV 102
Mavicyanin cd11014
Mavicyanin is a subclass of phytocyanins, a plant blue copper protein; Mavicyanin is a ...
 25-100 1.77e-15

Mavicyanin is a subclass of phytocyanins, a plant blue copper protein; Mavicyanin is a glycosylated protein isolated from Cucurbita pepo medullosa (zucchini) peelings. It belongs to the phytocyanin family of blue copper proteins, a ubiquitous family of plant cupredoxins. Mavicyanin is involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. The copper is tetrahedrally coordinated by a cysteine, 2 histidines, and a glutamine residue, like in the case of stellacyanin. The biological roles of mavicyanin have not been elucidated yet.


Pssm-ID: 259900  Cd Length: 101  Bit Score: 70.11  E-value: 1.77e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571  25 TQYLVGDDRGWTLDF--DYQTWAKNKTFKVGDTL-----------------------APPPSEGLTSGYDVITLTKPGKK 79
Cdd:cd11014     1 TVYKVGDSDGWTVYDsdYYYKWSSSKTFHVGDSLifqynkefhdvtevtgeefescnSTSPIAVYNTGHDIIKLTKPGQY 80

                          90       100
                  ....*....|....*....|.
gi 1859676571  80 WYICGVPTHCsDYNQKLVITV 100
Cdd:cd11014    81 YFICGVPGHC-DSGQKLQVNV 100
Stellacyanin cd13920
Stellacyanin is a subclass of phytocyanins, a plant type I copper protein; Stellacyanin is a ...
 25-100 3.98e-14

Stellacyanin is a subclass of phytocyanins, a plant type I copper protein; Stellacyanin is a subclass of the phytocyanins, a ubiquitous family of plant cupredoxins. Stellacyanin is involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. The copper is tetrahedrally coordinated by a cysteine, 2 histidines, and a glutamine residue. The glutamine residue substitutes for a methione ligand typically found in other blue copper proteins. The exact function of stellacyanin is unknown. However, stellacyanin appears to be associated with the plant cell wall; it may be involved in oxidative reactions to build polymeric material making up the cell wall.


Pssm-ID: 259987 [Multi-domain]  Cd Length: 101  Bit Score: 66.57  E-value: 3.98e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571  25 TQYLVGDDRGWTLDFD---YQTWAKNKTFKVGDTL-----------------------APPPSEGLTSGYDVITLTKPGK 78
Cdd:cd13920     1 TDHIVGGSLGWSIPPNasfYTDWAANRTFRVGDSLvfnfeagvhnvvevskeeydnctTTNPIKVFTTGPVIITLNETGT 80

                          90       100
                  ....*....|....*....|..
gi 1859676571  79 KWYICGVPTHCSdYNQKLVITV 100
Cdd:cd13920    81 RYFICTVGNHCS-LGQKVSINV 101
Cu_bind_like pfam02298
Plastocyanin-like domain; This family represents a domain found in flowering plants related to ...
 35-89 1.15e-12

Plastocyanin-like domain; This family represents a domain found in flowering plants related to the copper binding protein plastocyanin. Some members of this family may not bind copper due to the lack of key residues.


Pssm-ID: 280462  Cd Length: 84  Bit Score: 61.98  E-value: 1.15e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571  35 WT--LDFDYQTWAKNKTFKVGDTL-----------------------APPPSEGLTSGYDVITLTKPGKKWYICGVPTHC 89
Cdd:pfam02298   1 WTvnAESDYTTWAQGKTFRVGDTLvfkydsdfhnvvevtkadyescdTSKPIRNYTTGSDKVTLTKPGPNYFICGVPGHC 80
OsENODL1_like cd11019
Early nodulin-like protein (OsENODL1) and similar proteins; This family includes early ...
 25-100 8.98e-08

Early nodulin-like protein (OsENODL1) and similar proteins; This family includes early nodulin-like protein (OsENODL1) from Oryza sativa and similar proteins. It belongs to the phytocyanin family of blue copper proteins, a ubiquitous family of plant cupredoxins. Phytocyanin is involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. OsENODL1 expression occurs specifically at the late developmental stage of the seeds. Members of this subgroup appear to have lost the T1 copper binding site.


Pssm-ID: 259905  Cd Length: 103  Bit Score: 49.19  E-value: 8.98e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571  25 TQYLVGDDRGWTLDFD----YQTWAKNKTFKVGDTLA---PP--------------------PSEGLTSGYDVITLTKPG 77
Cdd:cd11019     1 REFKVGGKDGWKVPPSasesYNQWAERNRFQVGDSLVfkyDKgndsvlevtkedydscntssPIARFNDGNTKFTLDRSG 80

                          90       100
                  ....*....|....*....|...
gi 1859676571  78 KKWYICGVPTHCsDYNQKLVITV 100
Cdd:cd11019    81 PFYFISGAPGHC-EKGQKLIVVV 102
Phytocyanin_like_1 cd11017
A subclass of phytocyanins, plant blue or type I copper proteins; Phytocyanins are plant blue ...
 25-84 3.77e-03

A subclass of phytocyanins, plant blue or type I copper proteins; Phytocyanins are plant blue or type I copper proteins. They are involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. Phytocyanins are classified into four groups: stellacyanin, plantacyanin, uclacyanin and early nodulin groups. Members of this unknown subgroup appear to have lost the T1 copper binding site.


Pssm-ID: 259903  Cd Length: 99  Bit Score: 35.83  E-value: 3.77e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1859676571  25 TQYLVGDDR-GWTLDFDYQTWAKNKTFKVGD------------------------TLAPPPSEGLTSGYDVITLTKPGKK 79
Cdd:cd11017     1 TLHTVGGNRiGWNPNINYTDWAKMHGFYSGDwlvfryqrgrhnvvqvnetgydncDASNPISNYSSGGRDIFQLNETKRY 80


                  ....*
gi 1859676571  80 WYICG 84
Cdd:cd11017    81 YFICG 85
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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