1C1Y,4G0N,1GUA,1RFA,1RRB,3KUC,3KUD


Conserved Protein Domain Family
RBD_CRAF

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cd17135: RBD_CRAF 
Ras-binding domain (RBD) found in RAF proto-oncogene serine/threonine-protein kinase RAF1/CRAF
RAF1/CRAF, also termed proto-oncogene c-RAF (cRaf), or Raf-1, belongs to the RAF family. The RAF family includes three RAF kinases ARAF, BRAF, and RAF1/CRAF, encoded by proto-oncogenes, which activate the mitogen-activated protein kinase/extracellular-signal-regulated kinase (MAPK/ERK) cascade downstream of RAS. They share a common structure consisting of an N-terminal regulatory domain and a C-terminal kinase domain. There are three conserved regions (CR1-3) in the regulatory domain, CR1 contains a Ras-binding domain (RBD) and a cysteine-rich domain (CRD), CR2 is a serine/threonine-rich domain, and CR3 encodes the kinase domain required for RAF. The RBD of RAF has a beta-grasp ubiquitin-like fold, a common structure involved in protein-protein interactions. RAF1/CRAF is an important effector of Ras-mediated signaling and is a critical regulator of the MAPK/ERK pathway.
Statistics
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PSSM-Id: 340655
Aligned: 12 rows
Threshold Bit Score: 150.39
Created: 25-Jun-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 13 residues -Click on image for an interactive view with Cn3D
Feature 1:RBD_Raf-Ras interaction site [polypeptide binding site]
Evidence:
  • Comment:All RBDs share a common ubiquitin fold and bind to the same epitope on Ras.
  • Structure:1C1Y; Homo sapiens RBD of the Ras effector molecule CRAF is complexed with Ras-related protein Rap1A, contacts at 4A.
    View structure with Cn3D
  • Citation:PMID 7791872
  • Citation:PMID 8756332

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          # #    ###### #            #   ###                                         
1C1Y_B         1 SNTIRVFLPNKQRTVVNVRnGMSLHDCLMKALKVRGLQPECCAVFRLLHEhkgKKARLDWNTDAASLIGEELQVDFL 77  human
4G0N_B         2 SNTIRVFLPNKQRTVVNVRnGMSLHDCLMKALKVRGLQPECCAVFRLLHEhkgKKARLDWNTDAASLIGEELQVDFL 78  human
1GUA_B         5 SNTIRVFLPNKQRTVVNVRnGMSLHDCLMKALKVRGLQPECCAVFRLLHEhkgKKARLDWNTDAASLIGEELQVDFL 81  human
1RFA_A         2 SNTIRVFLPNKQRTVVNVRnGMSLHDCLMKALKVRGLQPECCAVFRLLHEhkgKKARLDWNTDAASLIGEELQVDFL 78  human
1RRB_A        18 SNTIRVFLPNKQRTVVNVRnGMSLHDCLMKALKVRGLQPECCAVFRLLQEhkgKKARLDWNTDAASLIGEELQVDFL 94  Norway rat
3KUC_B         5 SNTIRVFLPNKQRTVVRVRnGMSLHDCLMKKLKVRGLQPECCAVFRLLHEhkgKKARLDWNTDAASLIGEELQVDFL 81  human
3KUD_B         5 SNTIRVFLPNKQRTVVNVRnGMSLHDCLMKKLKVRGLQPECCAVFRLLHEhkgKKARLDWNTDAASLIGEELQVDFL 81  human
P05625        55 SNTIRVFLPNKQRTVVNVRnGMTLHDCLMKALKVRGLQPECCAVFRLVTEpkgKKVRLDWNTDAASLIGEELQVDFL 131 chicken
NP_571514     48 SRTIRVFLPNQQRTVVNVRpGMTLHSCLIKALKVRGLQPECCAVFSLHPGqrsKKSRMEWSTDSTSLIGEELLVEVL 124 zebrafish
P09560        55 SSTMRVYLPNKQRTVVNVRsGMSLHDCLMKSLKVRGLQPECCAVFRLIQDp-kGKLRLDWNTDAMSLVGAELQVDFL 130 African clawed frog
XP_006004467  61 STTIRVYLPHKQRTVANVRnGMTLQDCLIKALKVRGLQPECCAVFRLVHGqrgRRFRVDWNTDATSLIGEELQVDFL 137 coelacanth
XP_007901525  54 SGTIRVYLPNKQRTVVNVRpGMTVQDSLKKALKVRGLQPDCCAVFRLPHEg--PKYRIDWGTDATSLIGEELVVQVL 128 elephant shark

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