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Report for CCDS73156.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73156.1 Public Homo sapiens 10 KCNMA1 24 110 108 CCDS HistoryNCBI Gene:3778Re-query CCDS DB by CCDS ID:73156.1Re-query CCDS DB by GeneID:3778See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73156.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000618048.2 ENSP00000482747.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618048.2Link to Ensembl Protein Viewer:ENSP00000482747.1Re-query CCDS DB by Nucleotide ID:ENST00000618048Re-query CCDS DB by Protein ID:ENSP00000482747
Original member Current member NCBI NM_001271520.2 NP_001258449.1 Accepted alive Link to Nucleotide Sequence:NM_001271520.2Link to Protein Sequence:NP_001258449.1Re-query CCDS DB by Nucleotide ID:NM_001271520Re-query CCDS DB by Protein ID:NP_001258449Link to BLAST:NP_001258449.1

Chromosomal Locations for CCDS 73156.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 77636743 77637006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 77637265 77637642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (642 nt):
ATGGCAAATGGTGGCGGCGGCGGCGGCGGCAGCAGCGGCGGCGGCGGCGGCGGCGGAGGCAGCAGTCTTA
GAATGAGTAGCAATATCCACGCGAACCATCTCAGCCTAGACGCGTCCTCCTCCTCCTCCTCCTCCTCTTC
CTCTTCTTCTTCTTCCTCCTCCTCTTCCTCCTCGTCCTCGGTCCACGAGCCCAAGATGGATGCGCTCATC
ATCCCGGTGACCATGGAGGTGCCGTGCGACAGCCGGGGCCAACGCATGTGGTGGGCTTTCCTGGCCTCCT
CCATGGTGACTTTCTTCGGGGGCCTCTTCATCATCTTGCTCTGGCGGACGCTCAAGTACCTGTGGACCGT
GTGCTGCCACTGCGGGGGCAAGACGAAGGGTTGTTGGCGGCTGCGGCTGGGGCCGGGGTCGGGGACTCAC
AGGCTCGGGTGCCGTGGTGCGGGGTGGGGACAGCCAACTCAGCGGGGACGGAGGAAGCTGGGGGCAGCTG
GGTGCGTGTTTTGCACCGCTCACCTGCCGGGGCTCGGCTCCTGGCGGTGGGCGAGAGGGAGCACATCCGC
CCATACTTTAGGAACCTGTTGGGGAGATGAGTTCGTGGGGTCAGAAAGAAGGGAAAAATCCTTTGGGCAA
GGGAGAGAATAA

Translation (213 aa):
MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSSVHEPKMDALI
IPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGGKTKGCWRLRLGPGSGTH
RLGCRGAGWGQPTQRGRRKLGAAGCVFCTAHLPGLGSWRWARGSTSAHTLGTCWGDEFVGSERREKSFGQ
GRE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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