NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9985.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9985.1 Public Homo sapiens 14 ZFYVE21 24 110 108 CCDS HistoryNCBI Gene:79038Re-query CCDS DB by CCDS ID:9985.1Re-query CCDS DB by GeneID:79038See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9985.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311141.7 ENSP00000310543.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311141.7Link to Ensembl Protein Viewer:ENSP00000310543.2Re-query CCDS DB by Nucleotide ID:ENST00000311141Re-query CCDS DB by Protein ID:ENSP00000310543
Original member Current member NCBI NM_024071.4 NP_076976.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024071.4Link to Protein Sequence:NP_076976.1Re-query CCDS DB by Nucleotide ID:NM_024071Re-query CCDS DB by Protein ID:NP_076976Link to BLAST:NP_076976.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076976.1 234 Q9BQ24-1 234 100% 0 0

Chromosomal Locations for CCDS 9985.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 103715842 103715979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103726792 103726842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103727746 103727914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103728908 103728983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103729091 103729182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103732620 103732762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103732983 103733018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (705 nt):
ATGTCCTCCGAGGTGTCCGCGCGCCGCGACGCCAAGAAGCTGGTGCGCTCCCCGAGCGGCCTGCGCATGG
TGCCCGAACACCGCGCCTTCGGAAGCCCGTTCGGCCTGGAGGAGCCGCAGTGGGTCCCGGACAAGGAGTG
TCGGAGATGTATGCAGTGTGACGCCAAGTTTGACTTTCTCACCAGAAAGCACCACTGTCGCCGCTGCGGG
AAGTGCTTCTGCGACAGGTGCTGCAGCCAGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACCCCGTGC
GGCAGTGCGCGGAGTGCGCCCTCGTGTCCCTCAAGGAGGCGGAGTTCTACGACAAGCAGCTCAAAGTGCT
CCTGAGCGGAGCCACCTTCCTCGTCACGTTTGGAAACTCAGAGAAACCTGAAACTATGACTTGTCGTCTT
TCCAATAACCAGAGATACTTGTTTCTGGATGGAGACAGCCACTATGAAATCGAAATTGTACACATTTCCA
CCGTGCAGATCCTCACAGAAGGCTTCCCTCCTGGAGGAGGCAACGCACGGGCCACAGGCATGTTCCTGCA
GTATACAGTGCCGGGGACGGAGGGTGTGACCCAGCTGAAGCTGACAGTGGTGGAGGACGTGACTGTGGGC
AGGAGGCAGGCGGTGGCGTGGCTAGTGGCCATGCACAAGGCTGCCAAGCTCCTCTATGAATCTCGGGACC
AGTAA

Translation (234 aa):
MSSEVSARRDAKKLVRSPSGLRMVPEHRAFGSPFGLEEPQWVPDKECRRCMQCDAKFDFLTRKHHCRRCG
KCFCDRCCSQKVPLRRMCFVDPVRQCAECALVSLKEAEFYDKQLKVLLSGATFLVTFGNSEKPETMTCRL
SNNQRYLFLDGDSHYEIEIVHISTVQILTEGFPPGGGNARATGMFLQYTVPGTEGVTQLKLTVVEDVTVG
RRQAVAWLVAMHKAAKLLYESRDQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH