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Report for CCDS9349.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9349.1 Public Homo sapiens 13 STARD13 24 110 108 CCDS HistoryNCBI Gene:90627Re-query CCDS DB by CCDS ID:9349.1Re-query CCDS DB by GeneID:90627See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9349.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000255486.8 ENSP00000255486.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000255486.8Link to Ensembl Protein Viewer:ENSP00000255486.4Re-query CCDS DB by Nucleotide ID:ENST00000255486Re-query CCDS DB by Protein ID:ENSP00000255486
Original member Current member NCBI NM_178007.3 NP_821075.1 Accepted alive Link to Nucleotide Sequence:NM_178007.3Link to Protein Sequence:NP_821075.1Re-query CCDS DB by Nucleotide ID:NM_178007Re-query CCDS DB by Protein ID:NP_821075Link to BLAST:NP_821075.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_821075.1 1105 Q9Y3M8-2 1105 100% 0 0

Chromosomal Locations for CCDS 9349.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 33105593 33105710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33106758 33106934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33109873 33110090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33110686 33110907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33111778 33111892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33112721 33112931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33118065 33118263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33126081 33126240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33127373 33127546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33128929 33130289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33142310 33142373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33165337 33165418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33167551 33167622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33185878 33186022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3318 nt):
ATGCTGGAACCCTCCTCAGTTCTCCATGCAAACGTTAACCAGGCCCCTTTGTGGTGCTTGGTGCTGCGCT
GGTGCAGAGAATGCAAAGACACTGTCTGTGGTGGGAAACAGAAAAGCAGAGTGAACCACACATTCCAGCG
CCGGGAAATTGAGGCAAAAGAAGCATGTGACTGGCTCCGTGCTGCCGGGTTCCCGCAATACGCTCAGTTA
TATGAGGATTCACAATTTCCCATCAACATTGTGGCTGTCAAGAATGATCATGATTTTCTTGAAAAGGACC
TTGTAGAACCTCTTTGCAGACGACTAAATACGTTGAACAAGTGTGCCTCAATGAAACTTGATGTGAACTT
CCAAAGGAAAAAGGGTGACGACTCCGATGAGGAAGATCTTTGTATCAGCAACAAATGGACTTTCCAAAGA
ACCAGTCGCAGGTGGTCTCGTGTGGACGACCTCTACACGCTGCTCCCTCGAGGAGACAGAAATGGGTCAC
CGGGAGGCACGGGGATGAGGAACACGACCAGCAGTGAGAGCGTCCTCACAGACCTGAGCGAGCCTGAGGT
CTGCTCCATTCACAGCGAAAGCAGTGGAGGCAGCGACAGTCGCAGCCAGCCGGGCCAGTGCTGTACAGAC
AACCCGGTCATGCTGGATGCCCCACTCGTCAGCAGCAGCCTCCCACAGCCCCCCAGAGATGTCCTCAACC
ACCCCTTCCACCCCAAGAATGAGAAGCCCACGAGGGCTAGGGCCAAATCATTTTTGAAACGCATGGAAAC
ACTCCGAGGGAAGGGAGCCCACGGGAGGCATAAGGGGTCTGGGCGGACAGGTGGCCTGGTGATCAGTGGG
CCCATGTTGCAGCAGGAGCCAGAGTCCTTTAAGGCTATGCAGTGCATCCAAATACCAAATGGAGATCTCC
AGAATTCGCCGCCACCTGCCTGCAGAAAAGGGCTCCCATGCTCTGGCAAGTCGAGTGGCGAGAGCAGCCC
GTCGGAGCACAGCAGCAGCGGGGTGAGCACGCCCTGCCTGAAGGAACGCAAGTGCCACGAGGCCAACAAG
CGCGGGGGCATGTACTTGGAGGACCTAGATGTGCTGGCGGGGACAGCACTGCCGGATGCAGGGGACCAAA
GCCGTATGCATGAATTTCACTCCCAAGAGAATTTGGTGGTGCATATTCCCAAGGATCACAAACCAGGAAC
ATTCCCCAAGGCACTTTCTATTGAAAGCCTCTCTCCCACAGATAGTAGCAATGGGGTTAATTGGAGGACC
GGTAGCATCTCCCTGGGCAGAGAGCAGGTCCCTGGTGCCAGGGAGCCCCGGCTCATGGCGTCCTGCCACA
GAGCCAGCCGAGTCAGTATCTATGACAATGTCCCTGGCTCCCATCTGTATGCCAGCACAGGAGATCTTTT
GGACTTGGAGAAAGATGACCTTTTCCCTCACTTGGATGACATTCTGCAGCATGTCAATGGGCTCCAAGAG
GTAGTCGATGACTGGTCCAAAGATGTCTTGCCTGAACTGCAAACTCATGATACATTGGTTGGGGAACCTG
GCTTATCCACCTTTCCATCTCCTAATCAGATCACCTTAGATTTTGAAGGTAACTCTGTCTCAGAAGGTCG
GACGACACCCAGTGATGTGGAAAGAGATGTAACATCTCTTAATGAATCTGAGCCTCCTGGGGTCAGAGAC
AGGAGGGATTCTGGTGTAGGGGCCTCTCTGACCAGGCCAAACAGGCGACTCCGATGGAACAGTTTCCAGC
TGTCGCACCAGCCCCGGCCGGCCCCAGCATCGCCCCACATCAGCAGCCAGACGGCCAGCCAGCTGAGCCT
GCTCCAGCGCTTCTCACTGCTCCGCCTCACGGCCATCATGGAGAAGCACTCCATGTCCAACAAGCACGGC
TGGACATGGTCAGTTCCAAAGTTCATGAAGAGGATGAAAGTTCCCGACTACAAAGACAAGGCTGTCTTTG
GCGTTCCTCTCATAGTCCACGTCCAAAGAACGGGACAGCCCCTGCCTCAAAGTATTCAGCAAGCACTGAG
ATATCTACGCAGCAACTGCCTCGATCAGGTGGGTCTTTTTCGCAAATCAGGAGTGAAGTCTCGAATCCAT
GCCCTTCGCCAAATGAATGAAAACTTCCCTGAGAACGTCAACTATGAAGACCAGTCTGCTTATGATGTGG
CGGATATGGTGAAACAGTTCTTCCGGGACCTCCCTGAGCCTCTTTTCACCAACAAGCTCAGTGAGACCTT
TCTCCATATCTATCAGTATGTCTCCAAAGAGCAGCGGCTGCAGGCCGTGCAGGCTGCCATCCTGCTACTG
GCCGATGAGAACAGGGAGGTCCTGCAGACGCTCTTGTGTTTCCTGAACGACGTCGTCAACTTGGTGGAAG
AGAATCAGATGACGCCCATGAACCTGGCAGTGTGTCTGGCCCCCTCCCTCTTTCATCTTAATTTATTGAA
GAAAGAAAGCTCTCCACGAGTCATACAGAAGAAATATGCCACTGGGAAGCCAGATCAAAAGGACCTCAAC
GAGAATCTGGCAGCAGCTCAGGGGCTAGCGCACATGATCATGGAATGCGACAGACTTTTTGAGGTTCCAC
ACGAGTTGGTGGCCCAGTCTCGTAACTCGTATGTGGAGGCTGAGATCCACGTGCCAACCCTGGAAGAATT
GGGGACACAGCTGGAGGAGAGTGGGGCAACTTTCCACACTTACCTGAACCATCTCATCCAGGGCCTCCAG
AAAGAAGCCAAGGAGAAGTTCAAAGGATGGGTCACGTGCTCCAGCACGGACAATACAGATCTTGCTTTCA
AAAAGGTGGGCGACGGGAACCCGCTGAAGCTGTGGAAGGCTTCTGTGGAGGTGGAAGCACCCCCCTCAGT
GGTCCTGAACCGCGTGCTGAGAGAGCGCCACCTGTGGGACGAGGACTTTGTGCAGTGGAAGGTTGTGGAA
ACTCTAGACAGGCAAACAGAGATCTACCAGTATGTGCTGAACAGCATGGCTCCCCATCCTTCCAGAGACT
TTGTGGTTCTCAGGACCTGGAAAACTGATTTGCCCAAAGGAATGTGTACCCTGGTGTCCCTCTCCGTGGA
GCATGAGGAAGCCCAGCTCCTGGGTGGTGTGCGAGCAGTGGTGATGGACTCGCAGTACTTGATAGAACCG
TGTGGCTCTGGCAAGTCAAGACTGACTCACATCTGCAGGATAGACCTGAAAGGTCACTCCCCAGAATGGT
ACAGCAAAGGCTTTGGACATCTGTGTGCAGCAGAAGTTGCCAGGATTAGAAACTCTTTCCAGCCCCTCAT
TGCTGAGGGCCCAGAAACTAAAATCTGA

Translation (1105 aa):
MLEPSSVLHANVNQAPLWCLVLRWCRECKDTVCGGKQKSRVNHTFQRREIEAKEACDWLRAAGFPQYAQL
YEDSQFPINIVAVKNDHDFLEKDLVEPLCRRLNTLNKCASMKLDVNFQRKKGDDSDEEDLCISNKWTFQR
TSRRWSRVDDLYTLLPRGDRNGSPGGTGMRNTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTD
NPVMLDAPLVSSSLPQPPRDVLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISG
PMLQQEPESFKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEANK
RGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSPTDSSNGVNWRT
GSISLGREQVPGAREPRLMASCHRASRVSIYDNVPGSHLYASTGDLLDLEKDDLFPHLDDILQHVNGLQE
VVDDWSKDVLPELQTHDTLVGEPGLSTFPSPNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPPGVRD
RRDSGVGASLTRPNRRLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSNKHG
WTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIH
ALRQMNENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLL
ADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYATGKPDQKDLN
ENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQLEESGATFHTYLNHLIQGLQ
KEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKVVE
TLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEP
CGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSFQPLIAEGPETKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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