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Report for CCDS9208.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9208.1 Public Homo sapiens 12 SPPL3 24 110 108 CCDS HistoryNCBI Gene:121665Re-query CCDS DB by CCDS ID:9208.1Re-query CCDS DB by GeneID:121665See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9208.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000353487.7 ENSP00000288680.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000353487.7Link to Ensembl Protein Viewer:ENSP00000288680.4Re-query CCDS DB by Nucleotide ID:ENST00000353487Re-query CCDS DB by Protein ID:ENSP00000288680
Original member Current member NCBI NM_139015.5 NP_620584.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_139015.5Link to Protein Sequence:NP_620584.2Re-query CCDS DB by Nucleotide ID:NM_139015Re-query CCDS DB by Protein ID:NP_620584Link to BLAST:NP_620584.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_620584.2 384 Q8TCT6-2 384 100% 0 0

Chromosomal Locations for CCDS 9208.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 120764999 120765070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120766263 120766372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120767394 120767593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120768325 120768488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120768953 120769059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120782655 120782767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120783674 120783752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120784474 120784593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120791469 120791557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120810809 120810886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120903845 120903867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1155 nt):
ATGGCGGAGCAGACCTACTCGTGGGCCTATTCCCTGGTGGATTCCAGTCAAGTGTCTACATTTCTGATTT
CCATTCTTCTTATAGTCTATGGTAGTTTCAGGTCCCTTAATATGGACTTTGAAAATCAAGATAAGGAGAA
AGACAGTAATAGTTCTTCTGGGTCTTTCAATGGCAACAGCACCAATAATAGCATCCAAACAATTGACTCT
ACCCAGGCTCTGTTCCTTCCAATTGGAGCATCTGTCTCTCTTTTAGTAATGTTCTTCTTCTTTGACTCAG
TTCAAGTAGTTTTTACAATATGTACAGCAGTTCTTGCAACGATAGCTTTTGCTTTTCTTCTCCTCCCGAT
GTGCCAGTATTTAACAAGACCCTGCTCACCTCAGAACAAGATTTCCTTTGGTTGCTGTGGACGTTTCACT
GCTGCTGAGTTGCTGTCATTCTCTCTGTCTGTCATGCTCGTCCTCATCTGGGTTCTCACTGGCCATTGGC
TTCTCATGGATGCACTGGCCATGGGCCTCTGTGTCGCCATGATCGCCTTTGTCCGCCTGCCGAGCCTCAA
GGTCTCCTGCCTGCTTCTCTCAGGGCTTCTCATCTATGATGTCTTTTGGGTATTTTTCTCAGCCTACATC
TTCAATAGCAACGTCATGGTGAAGGTGGCCACTCAGCCGGCTGACAATCCCCTTGACGTTCTATCCCGGA
AGCTCCACCTGGGGCCCAATGTTGGGCGTGATGTTCCTCGCCTGTCTCTGCCTGGAAAACTGGTCTTCCC
AAGCTCCACTGGCAGCCACTTCTCCATGTTGGGCATCGGAGACATCGTTATGCCTGGTCTCCTACTATGC
TTTGTCCTTCGCTATGACAACTACAAAAAGCAAGCCAGTGGGGACTCCTGTGGGGCCCCTGGACCTGCCA
ACATCTCCGGGCGCATGCAGAAGGTCTCCTACTTTCACTGCACCCTCATCGGATACTTTGTAGGCCTGCT
CACTGCTACTGTGGCGTCTCGCATTCACCGGGCCGCCCAGCCCGCCCTTCTCTATTTGGTGCCATTTACT
TTATTGCCACTCCTCACGATGGCCTATTTAAAGGGCGACCTCCGGCGGATGTGGTCTGAGCCTTTCCACT
CCAAGTCCAGCAGCTCCCGATTCCTGGAAGTATGA

Translation (384 aa):
MAEQTYSWAYSLVDSSQVSTFLISILLIVYGSFRSLNMDFENQDKEKDSNSSSGSFNGNSTNNSIQTIDS
TQALFLPIGASVSLLVMFFFFDSVQVVFTICTAVLATIAFAFLLLPMCQYLTRPCSPQNKISFGCCGRFT
AAELLSFSLSVMLVLIWVLTGHWLLMDALAMGLCVAMIAFVRLPSLKVSCLLLSGLLIYDVFWVFFSAYI
FNSNVMVKVATQPADNPLDVLSRKLHLGPNVGRDVPRLSLPGKLVFPSSTGSHFSMLGIGDIVMPGLLLC
FVLRYDNYKKQASGDSCGAPGPANISGRMQKVSYFHCTLIGYFVGLLTATVASRIHRAAQPALLYLVPFT
LLPLLTMAYLKGDLRRMWSEPFHSKSSSSRFLEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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