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Report for CCDS8766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8766.1 Public Homo sapiens 12 CCNT1 24 110 108 CCDS HistoryNCBI Gene:904Re-query CCDS DB by CCDS ID:8766.1Re-query CCDS DB by GeneID:904See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8766.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261900.8 ENSP00000261900.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261900.8Link to Ensembl Protein Viewer:ENSP00000261900.3Re-query CCDS DB by Nucleotide ID:ENST00000261900Re-query CCDS DB by Protein ID:ENSP00000261900
Original member Current member NCBI NM_001240.4 NP_001231.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001240.4Link to Protein Sequence:NP_001231.2Re-query CCDS DB by Nucleotide ID:NM_001240Re-query CCDS DB by Protein ID:NP_001231Link to BLAST:NP_001231.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001231.2 726 O60563-1 726 100% 0 0

Chromosomal Locations for CCDS 8766.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 48693033 48694436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48695759 48695829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48695999 48696162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48698138 48698183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48699778 48699840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48701013 48701073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48705768 48705896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48714443 48714524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48716515 48716675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2181 nt):
ATGGAGGGAGAGAGGAAGAACAACAACAAACGGTGGTATTTCACTCGAGAACAGCTGGAAAATAGCCCAT
CCCGTCGTTTTGGCGTGGACCCAGATAAAGAACTTTCTTATCGCCAGCAGGCGGCCAATCTGCTTCAGGA
CATGGGGCAGCGTCTTAACGTCTCACAATTGACTATCAACACTGCTATAGTATACATGCATCGATTCTAC
ATGATTCAGTCCTTCACACAGTTCCCTGGAAATTCTGTGGCTCCAGCAGCCTTGTTTCTAGCAGCTAAAG
TGGAGGAGCAGCCCAAAAAATTGGAACATGTCATCAAGGTAGCACATACTTGTCTCCATCCTCAGGAATC
CCTTCCTGATACTAGAAGTGAGGCTTATTTGCAACAAGTTCAAGATCTGGTCATTTTAGAAAGCATAATT
TTGCAGACTTTAGGCTTTGAACTAACAATTGATCACCCACATACTCATGTAGTAAAGTGCACTCAACTTG
TTCGAGCAAGCAAGGACTTAGCACAGACTTCTTACTTCATGGCAACCAACAGCCTGCATTTGACCACATT
TAGCCTGCAGTACACACCTCCTGTGGTGGCCTGTGTCTGCATTCACCTGGCTTGCAAGTGGTCCAATTGG
GAGATCCCAGTCTCAACTGACGGGAAGCACTGGTGGGAGTATGTTGACGCCACTGTGACCTTGGAACTTT
TAGATGAACTGACACATGAGTTTCTACAGATTTTGGAGAAAACTCCCAACAGGCTCAAACGCATTTGGAA
TTGGAGGGCATGCGAGGCTGCCAAGAAAACAAAAGCAGATGACCGAGGAACAGATGAAAAGACTTCAGAG
CAGACAATCCTCAATATGATTTCCCAGAGCTCTTCAGACACAACCATTGCAGGTTTAATGAGCATGTCAA
CTTCTACCACAAGTGCAGTGCCTTCCCTGCCAGTCTCCGAAGAGTCATCCAGCAACTTAACCAGTGTGGA
GATGTTGCCGGGCAAGCGTTGGCTGTCCTCCCAACCTTCTTTCAAACTAGAACCTACTCAGGGTCATCGG
ACTAGTGAGAATTTAGCACTTACAGGAGTTGATCATTCCTTACCACAGGATGGTTCAAATGCATTTATTT
CCCAGAAGCAGAATAGTAAGAGTGTGCCATCAGCTAAAGTGTCACTGAAAGAATACCGCGCGAAGCATGC
AGAAGAATTGGCTGCCCAGAAGAGGCAACTGGAGAACATGGAAGCCAATGTGAAGTCACAATATGCATAT
GCTGCCCAGAATCTCCTTTCTCATCATGATAGCCATTCTTCAGTCATTCTAAAAATGCCCATAGAGGGTT
CAGAAAACCCCGAGCGGCCTTTTCTGGAAAAGGCTGACAAAACAGCTCTCAAAATGAGAATCCCAGTGGC
AGGTGGAGATAAAGCTGCGTCTTCAAAACCAGAGGAGATAAAAATGCGCATAAAAGTCCATGCTGCAGCT
GATAAGCACAATTCTGTAGAGGACAGTGTTACAAAGAGCCGAGAGCACAAAGAAAAGCACAAGACTCACC
CATCTAATCATCATCATCATCATAATCACCACTCACACAAGCACTCTCATTCCCAACTTCCAGTTGGTAC
TGGGAACAAACGTCCTGGTGATCCAAAACATAGTAGCCAGACAAGCAACTTAGCACATAAAACCTATAGC
TTGTCTAGTTCTTTTTCCTCTTCCAGTTCTACTCGTAAAAGGGGACCCTCTGAAGAGACTGGAGGGGCTG
TGTTTGATCATCCAGCCAAGATTGCCAAGAGTACTAAATCCTCTTCCCTAAATTTCTCCTTCCCTTCACT
TCCTACAATGGGTCAGATGCCTGGGCATAGCTCAGACACAAGTGGCCTTTCCTTTTCACAGCCCAGCTGT
AAAACTCGTGTCCCTCATTCGAAACTGGATAAAGGGCCCACTGGGGCCAATGGTCACAACACGACCCAGA
CAATAGACTATCAAGACACTGTGAATATGCTTCACTCCCTGCTCAGTGCCCAGGGTGTTCAGCCCACTCA
GCCCACTGCATTTGAATTTGTTCGTCCTTATAGTGACTATCTGAATCCTCGGTCTGGTGGAATCTCCTCG
AGATCTGGCAATACAGACAAACCCCGGCCACCACCTCTGCCATCAGAACCTCCTCCACCACTTCCACCCC
TTCCTAAGTAA

Translation (726 aa):
MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFY
MIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPDTRSEAYLQQVQDLVILESII
LQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACKWSNW
EIPVSTDGKHWWEYVDATVTLELLDELTHEFLQILEKTPNRLKRIWNWRACEAAKKTKADDRGTDEKTSE
QTILNMISQSSSDTTIAGLMSMSTSTTSAVPSLPVSEESSSNLTSVEMLPGKRWLSSQPSFKLEPTQGHR
TSENLALTGVDHSLPQDGSNAFISQKQNSKSVPSAKVSLKEYRAKHAEELAAQKRQLENMEANVKSQYAY
AAQNLLSHHDSHSSVILKMPIEGSENPERPFLEKADKTALKMRIPVAGGDKAASSKPEEIKMRIKVHAAA
DKHNSVEDSVTKSREHKEKHKTHPSNHHHHHNHHSHKHSHSQLPVGTGNKRPGDPKHSSQTSNLAHKTYS
LSSSFSSSSSTRKRGPSEETGGAVFDHPAKIAKSTKSSSLNFSFPSLPTMGQMPGHSSDTSGLSFSQPSC
KTRVPHSKLDKGPTGANGHNTTQTIDYQDTVNMLHSLLSAQGVQPTQPTAFEFVRPYSDYLNPRSGGISS
RSGNTDKPRPPPLPSEPPPPLPPLPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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